RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CLDN4O14493 209 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 PRAMEF4O60810 478 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 CTNSO60931 367 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 BANF1O75531 89 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 P04436 131 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 PTMSP20962 102 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 SAT1P21673 171 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 DCAF7P61962 342 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 PRAMEF9Q5VWM5 478 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 CXorf67Q86X51 503 aaPredicted RBP14.13□□□□□ -0.15
MCF2L-228ENST00000487354 C9orf40Q8IXQ3 194 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 FBXW8Q8N3Y1 598 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 NEIL3Q8TAT5 605 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 PAQR8Q8TEZ7 354 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 DAZLQ92904 295 aaKnown RBP14.13□□□□□ -0.15
MCF2L-228ENST00000487354 KIAA1191Q96A73 305 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 ALOXE3Q9BYJ1 711 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 ARID1AO14497 2285 aa14.13□□□□□ -0.15
MCF2L-228ENST00000487354 RAI1Q7Z5J4 1906 aaPredicted RBP14.13□□□□□ -0.15
MCF2L-228ENST00000487354 C17orf105B2RV13 164 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 CDC7O00311 574 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 DVL2O14641 736 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 B3GALT2O43825 422 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 LDB3O75112 727 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 LY6G6DO95868 133 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 EPPINO95925 133 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 IFNA16P05015 189 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 EPXP11678 715 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 SLC6A12P48065 614 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 PLA2G16P53816 162 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 CRYZQ08257 329 aaKnown RBP14.12□□□□□ -0.15
MCF2L-228ENST00000487354 ASPHQ12797 758 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 KEAP1Q14145 624 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 SLBPQ14493 270 aaKnown RBP eCLIP14.12□□□□□ -0.15
MCF2L-228ENST00000487354 MPEG1Q2M385 716 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 PIGGQ5H8A4 983 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 PRAMEF20Q5VT98 475 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 ABHD17CQ6PCB6 329 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 OPN5Q6U736 354 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF793Q6ZN11 406 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 GALNT7Q86SF2 657 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 CIARTQ8N365 385 aaPredicted RBP14.12□□□□□ -0.15
MCF2L-228ENST00000487354 OR2L5Q8NG80 312 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 LINC01560Q8TB33 94 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 MAIP1Q8WWC4 291 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 PDLIM5Q96HC4 596 aaKnown RBP14.12□□□□□ -0.15
MCF2L-228ENST00000487354 FAR2Q96K12 515 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 SERINC2Q96SA4 455 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 WDR83Q9BRX9 315 aaKnown RBP14.12□□□□□ -0.15
MCF2L-228ENST00000487354 ACKR4Q9NPB9 350 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 PRDM7Q9NQW5 492 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 EDARQ9UNE0 448 aa14.12□□□□□ -0.15
MCF2L-228ENST00000487354 CHCHD2Q9Y6H1 151 aaPredicted RBP14.12□□□□□ -0.15
MCF2L-228ENST00000487354 MED12LQ86YW9 2145 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 NPEPPSL1A6NEC2 478 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 HRKO00198 91 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 HRGP04196 525 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 IGKV3-11P04433 115 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 C1GALT1C1LP0DN25 315 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 PGAM1P18669 254 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 ADSLP30566 484 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-228ENST00000487354 CXCR5P32302 372 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 TIMP3P35625 211 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 GDF5P43026 501 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 ID2Q02363 134 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 PDAP1Q13442 181 aaKnown RBP14.11□□□□□ -0.15
MCF2L-228ENST00000487354 MSS51Q4VC12 460 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 TMIGD1Q6UXZ0 262 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 DGAT2L6Q6ZPD8 337 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 UBE3DQ7Z6J8 389 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 IGDCC3Q8IVU1 814 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 NUBPLQ8TB37 319 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 ANKRD9Q96BM1 317 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-228ENST00000487354 SPACA9Q96E40 222 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-228ENST00000487354 COX4I2Q96KJ9 171 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 TRIM54Q9BYV2 358 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 EXO5Q9H790 373 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 ZFP64Q9NPA5 681 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 JKAMPQ9P055 326 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 CNOT11Q9UKZ1 510 aaKnown RBP14.11□□□□□ -0.15
MCF2L-228ENST00000487354 MRPS33Q9Y291 106 aaKnown RBP14.11□□□□□ -0.15
MCF2L-228ENST00000487354 KCNE2Q9Y6J6 123 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 ATRQ13535 2644 aa14.11□□□□□ -0.15
MCF2L-228ENST00000487354 SYNDIG1LA6NDD5 238 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 TUBAL3A6NHL2 446 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 CLEC3AO75596 197 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 LRATO95237 230 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF37AP17032 561 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-228ENST00000487354 TRPC1P48995 793 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 MTTPP55157 894 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 IGLV3-21P80748 117 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-228ENST00000487354 CDKL1Q00532 357 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 TAOK1Q7L7X3 1001 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 LACC1Q8IV20 430 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 OR10G3Q8NGC4 313 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 MAPKAP1Q9BPZ7 522 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 REXO4Q9GZR2 422 aaKnown RBP14.1□□□□□ -0.15
MCF2L-228ENST00000487354 HOMER3Q9NSC5 361 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 BEX4Q9NWD9 120 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms