RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 BHLHB9Q6PI77 547 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 RABEPKQ7Z6M1 372 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 TEX26Q8N6G2 289 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 OR8H1Q8NGG4 311 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 OR6S1Q8NH40 331 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 FAM76AQ8TAV0 307 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 CD99L2Q8TCZ2 262 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 MRGPRDQ8TDS7 321 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 DNASE2BQ8WZ79 361 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 ULK4Q96C45 1275 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 BPIFA2Q96DR5 249 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 LRR1Q96L50 414 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 FAM218AQ96MZ4 157 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 IL12RB2Q99665 862 aa4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 MTIF3Q9H2K0 278 aaKnown RBP4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 MRPS28Q9Y2Q9 187 aaKnown RBP4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 TDRKHQ9Y2W6 561 aaKnown RBP4.31□□□□□ -1.72
PRPF38A-203ENST00000487160 PXDNLA1KZ92 1463 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 DLEC1Q9Y238 1755 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 COL5A3P25940 1745 aaPredicted RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 NEDD4P46934 1319 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 A0A087WYN8 130 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 SYCE3A1L190 88 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 GTPBP10A4D1E9 387 aaKnown RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 SLCO1B7G3V0H7 640 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 SLC1A7O00341 560 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 HTATSF1O43719 755 aaKnown RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 MAGEC1O60732 1142 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 CLN5O75503 358 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 GAS8O95995 478 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 NUDT17P0C025 328 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 PTMSP20962 102 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 SLC1A3P43003 542 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 GFPT1Q06210 699 aaPredicted RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 LCP2Q13094 533 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 CEACAM7Q14002 265 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 GRB14Q14449 540 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 TAB1Q15750 504 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 KRTAP24-1Q3LI83 254 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 FAM106AQ4KMX7 169 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 TCEAL6Q6IPX3 200 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 TATDN1Q6P1N9 297 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNF410Q86VK4 478 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 CCDC185Q8N715 623 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 RNF149Q8NC42 400 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 NEK11Q8NG66 645 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 MAPK15Q8TD08 544 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 CASP10Q92851 521 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 OMA1Q96E52 524 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 SPATA13Q96N96 652 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 NTMT1Q9BV86 223 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 WDR13Q9H1Z4 485 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 ZDHHC6Q9H6R6 413 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNF696Q9H7X3 374 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 ZCCHC3Q9NUD5 404 aaKnown RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 ATAD3AQ9NVI7 634 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 MIS18AQ9NYP9 233 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 DBF4Q9UBU7 674 aaPredicted RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 KCNK6Q9Y257 313 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 FOXA2Q9Y261 457 aaPredicted RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 DICER1Q9UPY3 1922 aaKnown RBP4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 CACNA1SQ13698 1873 aa4.3□□□□□ -1.72
PRPF38A-203ENST00000487160 C10orf71Q711Q0 1435 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 USP47Q96K76 1375 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 PRR23AA6NEV1 266 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 C15orf61A6NNL5 157 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 PSMD3O43242 534 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 SYT7O43581 403 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 BCAS2O75934 225 aaPredicted RBP4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CLDN1O95832 211 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CHRNGP07510 517 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CFC1P0CG37 223 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 SKILP12757 684 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CTNNA2P26232 953 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 GUCY2DQ02846 1103 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CNTN1Q12860 1018 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 GK2Q14410 553 aaPredicted RBP4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 MTF1Q14872 753 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 PKN2Q16513 984 aaKnown RBP4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNF776Q68DI1 518 aaPredicted RBP4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 ETFRF1Q6IPR1 90 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 ARHGAP11AQ6P4F7 1023 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 OR4D10Q8NGI6 311 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 SPATA18Q8TC71 538 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 SMPDL3AQ92484 453 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 HAS2Q92819 552 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 SLC35C1Q96A29 364 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 ZNF560Q96MR9 790 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 TMEM237Q96Q45 408 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 LITAFQ99732 161 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 UBAC1Q9BSL1 405 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 CLEC7AQ9BXN2 247 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 LRRC2Q9BYS8 371 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 TSPYL1Q9H0U9 437 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 PLCXD1Q9NUJ7 323 aa4.29□□□□□ -1.72
PRPF38A-203ENST00000487160 HMG20BQ9P0W2 317 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms