RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FRG2Q64ET8 278 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 SPINK14Q6IE38 97 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 HSDL2Q6YN16 418 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 ZCCHC7Q8N3Z6 543 aaKnown RBP12.02□□□□□ -0.49
CHMP3-208ENST00000486404 NSUN5Q96P11 429 aaKnown RBP12.02□□□□□ -0.49
CHMP3-208ENST00000486404 DGAT2Q96PD7 388 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 FRG2BQ96QU4 278 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 HES7Q9BYE0 225 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 RPF2Q9H7B2 306 aaKnown RBP12.02□□□□□ -0.49
CHMP3-208ENST00000486404 KCMF1Q9P0J7 381 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 SEC14L3Q9UDX4 400 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 FETUBQ9UGM5 382 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 TBK1Q9UHD2 729 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 ERRFI1Q9UJM3 462 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-208ENST00000486404 PCDHGB6Q9Y5F9 930 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 DIDO1Q9BTC0 2240 aaKnown RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ICE1Q9Y2F5 2266 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 GOLGA8RI6L899 631 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 FOXE1O00358 373 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 FGF17O60258 216 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 OR10H2O60403 315 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ITGA10O75578 1167 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ZFAND5O76080 213 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 SEMA3DO95025 777 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 UNC5CO95185 931 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 GP1BBP13224 206 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 GCAP28676 217 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 HLCSP50747 726 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 SSR4P51571 173 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 TDGF1P3P51864 188 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 NEK2P51955 445 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 KCNK10P57789 538 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ALDH6A1Q02252 535 aaKnown RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 MAPKAPK3Q16644 382 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 GGTA1PQ4G0N0 100 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 C4orf17Q53FE4 359 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 SGO1Q5FBB7 561 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 TIFABQ6ZNK6 161 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 PAGE2Q7Z2X7 111 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 GALNTL5Q7Z4T8 443 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 MILR1Q7Z6M3 343 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 CYP4Z2PQ8N1L4 340 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 MORN4Q8NDC4 146 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 OR4F6Q8NGB9 312 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 WDR20Q8TBZ3 569 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ACMSDQ8TDX5 336 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF483Q8TF39 744 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 MTFMTQ96DP5 389 aaKnown RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 SCMH1Q96GD3 660 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 MAGED4Q96JG8 741 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 PELOQ9BRX2 385 aaKnown RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 NTMT1Q9BV86 223 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 AHSPQ9NZD4 102 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 SNX6Q9UNH7 406 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 PPIEQ9UNP9 301 aaKnown RBP12.01□□□□□ -0.49
CHMP3-208ENST00000486404 ERVK-11Q9UQG0 969 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 CLDN16Q9Y5I7 305 aa12.01□□□□□ -0.49
CHMP3-208ENST00000486404 A0A0A6YYD5 115 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 A1L4Q6 167 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 SMIM23A6NLE4 172 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 NME2P1O60361 137 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 EEDO75530 441 aaKnown RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 NEURL1O76050 574 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 SP1P08047 785 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 GSTA1P08263 222 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 FAM58BPP0C7Q3 252 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF24P17028 368 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 KRT15P19012 456 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 NME2P22392 152 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 TRHRP34981 398 aaPredicted RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 STT3AP46977 705 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 CASP6P55212 293 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 HNRNPH2P55795 449 aaKnown RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 HERVK_113P63132 956 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 FOLH1Q04609 750 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 C6orf163Q5TEZ5 329 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF468Q5VIY5 522 aaPredicted RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 OR52E8Q6IFG1 317 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 SLC25A25Q6KCM7 469 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 EIF1ADQ8N9N8 165 aaKnown RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 SLC2A12Q8TD20 617 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 SELENOMQ8WWX9 145 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 ASB15Q8WXK1 588 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 TANKQ92844 425 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 ART5Q96L15 291 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 ERVK-6Q9BXR3 956 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 L2HGDHQ9H9P8 463 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 PPCSQ9HAB8 311 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12□□□□□ -0.49
CHMP3-208ENST00000486404 VTI1BQ9UEU0 232 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 TRPS1Q9UHF7 1281 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF223Q9UK11 482 aaPredicted RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 PPT2Q9UMR5 302 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 SLC12A4Q9UP95 1085 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 STK38LQ9Y2H1 464 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms