RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 FCRL4Q96PJ5 515 aa10.57□□□□□ -0.72
HDAC6-228ENST00000486227 DSN1Q9H410 356 aa10.57□□□□□ -0.72
HDAC6-228ENST00000486227 FAM118AQ9NWS6 357 aa10.57□□□□□ -0.72
HDAC6-228ENST00000486227 TAS2R9Q9NYW1 312 aa10.57□□□□□ -0.72
HDAC6-228ENST00000486227 GRIP1Q9Y3R0 1128 aa10.57□□□□□ -0.72
HDAC6-228ENST00000486227 LY75O60449 1722 aa10.57□□□□□ -0.72
HDAC6-228ENST00000486227 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 NUP205Q92621 2012 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SLC30A4O14863 429 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 KIAA0355O15063 1070 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 B4GALT3O60512 393 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CYP17A1P05093 508 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ASGR2P07307 311 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ATF4P18848 351 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SLC6A11P48066 632 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CTSCP53634 463 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CD83Q01151 205 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 RAPSNQ13702 412 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ZNF542PQ5EBM4 170 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 C10orf62Q5T681 223 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 XKRXQ6PP77 449 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 NXPE4Q6UWF7 544 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 FAM220AQ7Z4H9 259 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CLEC14AQ86T13 490 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ATP6V1C2Q8NEY4 427 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 RELTQ969Z4 430 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 APIPQ96GX9 242 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ZNF486Q96H40 463 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 UBXN10Q96LJ8 280 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 GINS4Q9BRT9 223 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 DPH7Q9BTV6 452 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SLC17A9Q9BYT1 436 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 PNO1Q9NRX1 252 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 OLAHQ9NV23 265 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 GPR34Q9UPC5 381 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 FEZF1A0PJY2 475 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 HMX2A2RU54 273 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 A8MUA0 341 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SLC1A7O00341 560 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 REM1O75628 298 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 H1F0P07305 194 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 GNAO1P09471 354 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CD9P21926 228 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SLC14A2Q15849 920 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 VMACQ2NL98 169 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CTSL3PQ5NE16 218 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CXorf57Q6NSI4 855 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 IQCHQ86VS3 1027 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CCDC116Q8IYX3 515 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 OR10H5Q8NGA6 315 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ZBP1Q9H171 429 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CWH43Q9H720 699 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 AGPAT4Q9NRZ5 378 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 LINC01553A4QN01 128 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SLITRK5O94991 958 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ATP5A1P25705 553 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 MXD1Q05195 221 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 SHHQ15465 462 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 TBRG1Q3YBR2 411 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ZNF311Q5JNZ3 666 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 PAGE3Q5JUK9 113 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 MANEALQ5VSG8 457 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 KIAA1614Q5VZ46 1190 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 RFLNAQ6ZTI6 216 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 WFDC5Q8TCV5 224 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 GFM1Q96RP9 751 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 DPH2Q9BQC3 489 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 GPN2Q9H9Y4 310 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ANKMY1Q9P2S6 941 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 B4GALT2O60909 372 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 KDELR2P33947 212 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CSNK1DP48730 415 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 HYAL2Q12891 473 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 GTDC1Q4AE62 458 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 RABEPKQ7Z6M1 372 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 LAPTM4BQ86VI4 370 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 CLIP4Q8N3C7 705 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 NARS2Q96I59 477 aaKnown RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ERVK-18Q9QC07 812 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 RHCGQ9UBD6 479 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 C19orf25Q9UFG5 118 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-228ENST00000486227 ENPP5Q9UJA9 477 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 IFT52Q9Y366 437 aa10.56□□□□□ -0.72
HDAC6-228ENST00000486227 AQP9O43315 295 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 PRAMEF12O95522 483 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 NUDT6P53370 316 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 GSTM4Q03013 218 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 LRP8Q14114 963 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 KCNJ8Q15842 424 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 ANKDD1AQ495B1 522 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 REEP3Q6NUK4 255 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 LARP4Q71RC2 724 aaKnown RBP eCLIP10.55□□□□□ -0.727e-7■■■■■ 35.5
HDAC6-228ENST00000486227 CLECL1Q8IZS7 167 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 TMEM156Q8N614 296 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 RPLP0P6Q8NHW5 317 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 HCAR2Q8TDS4 363 aa10.55□□□□□ -0.72
HDAC6-228ENST00000486227 BCL7CQ8WUZ0 217 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms