RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CNTRLQ7Z7A1 2325 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 CSMD2Q7Z408 3487 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 PEX12O00623 359 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 TMPRSS11DO60235 418 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 B4GALT2O60909 372 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 ZWINTO95229 277 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 CBX6O95503 412 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 HPP00738 406 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 KRT6AP02538 564 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 KRT6BP04259 564 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 HSD3B1P14060 373 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 CHN1P15882 459 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 JAK1P23458 1154 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 HSD3B2P26439 372 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 HMOX2P30519 316 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 KRT6CP48668 564 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 HNRNPH2P55795 449 aaKnown RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 EEF1A2Q05639 463 aaKnown RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 Q0VFX4 171 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 GALNT1Q10472 559 aaPredicted RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 ASPHQ12797 758 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 ABRAXAS2Q15018 415 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 AP5B1Q2VPB7 878 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 MFSD4BQ5TF39 518 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 MRM1Q6IN84 353 aaKnown RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 NUDT13Q86X67 352 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 SCUBE1Q8IWY4 988 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 METTL4Q8N3J2 472 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 FAM47BQ8NA70 645 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 ADAMTS18Q8TE60 1221 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 CNDP1Q96KN2 507 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 FER1L6-AS2Q96M78 137 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 SH3GL2Q99962 352 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 CENPKQ9BS16 269 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 ACPTQ9BZG2 426 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 SHCBP1LQ9BZQ2 653 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 ZNF700Q9H0M5 742 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
SSR4-211ENST00000486204 RUBCNLQ9H714 662 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 MLXIPLQ9NP71 852 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 SLC12A4Q9UP95 1085 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
SSR4-211ENST00000486204 EML6Q6ZMW3 1958 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 TCRBV16S1A1N1A0A5B0 115 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 TMEM120BA0PK00 339 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 PSMD12O00232 456 aaPredicted RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 ULK1O75385 1050 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 SASH3O75995 380 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 MAOAP21397 527 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 CCL11P51671 97 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 RRADP55042 308 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 SOX8P57073 446 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 MAGOHP61326 146 aaKnown RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 ZNF33BQ06732 778 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 SLAMF1Q13291 335 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 RCN2Q14257 317 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 ARL13AQ5H913 290 aaPredicted RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 AGBL2Q5U5Z8 902 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 KANK2Q63ZY3 851 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 CLEC6AQ6EIG7 209 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 HDXQ7Z353 690 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 COMMD6Q7Z4G1 85 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 CPEB2Q7Z5Q1 589 aaKnown RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 Q8NA96 180 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 C19orf60Q96EN9 201 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 C11orf24Q96F05 449 aaPredicted RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 POM121Q96HA1 1249 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 IMMP1LQ96LU5 166 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 VIPAS39Q9H9C1 493 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 ITGB1BP2Q9UKP3 347 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 MMACHCQ9Y4U1 282 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 ASB4Q9Y574 426 aa12.1□□□□□ -0.47
SSR4-211ENST00000486204 PCDHGA9Q9Y5G4 932 aaKnown RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
SSR4-211ENST00000486204 HIVEP3Q5T1R4 2406 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 IGHV3-20A0A0C4DH32 117 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 AZIN1O14977 448 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 BIRC5O15392 142 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 PRMT3O60678 531 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 DPM1O60762 260 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 GBAP04062 536 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 UROSP10746 265 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 SERPINB3P29508 390 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 SERPINB5P36952 375 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 SLC18A1P54219 525 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 HSD17B7P56937 341 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 HMGCS1Q01581 520 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 TNFRSF17Q02223 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms