RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SPIN4Q56A73 249 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 OR4N5Q8IXE1 308 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 CLYBLQ8N0X4 340 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 CDC26Q8NHZ8 85 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 CHTF18Q8WVB6 975 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 TWIST2Q8WVJ9 160 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 ABHD17AQ96GS6 310 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 THOC3Q96J01 351 aaKnown RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 LPAR4Q99677 370 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 TUBB6Q9BUF5 446 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 ADNPQ9H2P0 1102 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 RPF2Q9H7B2 306 aaKnown RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 ZNF71Q9NQZ8 489 aaPredicted RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 GPR83Q9NYM4 423 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 ASB4Q9Y574 426 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 DNAJC15Q9Y5T4 150 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 TNRC6AQ8NDV7 1962 aaKnown RBP11.1□□□□□ -0.63
HPS4-214ENST00000485842 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 SERTM1A2A2V5 107 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 BLACEA4D250 179 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 SLC28A1O00337 649 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 PIP5K1BO14986 540 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 PROM1O43490 865 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 RGS14O43566 566 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 CTNSO60931 367 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 RSL1D1O76021 490 aaKnown RBP11.1□□□□□ -0.63
HPS4-214ENST00000485842 IFNA16P05015 189 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 PRR35P0CG20 571 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 GRK2P25098 689 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 TIA1P31483 386 aaKnown RBP eCLIP11.1□□□□□ -0.63
HPS4-214ENST00000485842 SLC1A6P48664 564 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 SLC18A1P54219 525 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 BST1Q10588 318 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 NDUFAF5Q5TEU4 345 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 OR52E8Q6IFG1 317 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 TRIM46Q7Z4K8 759 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 KBTBD2Q8IY47 623 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 ZNF781Q8N8C0 355 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 FDCSPQ8NFU4 85 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 OR2T11Q8NH01 316 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 WBP1Q96G27 269 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 WDR77Q9BQA1 342 aaPredicted RBP11.1□□□□□ -0.63
HPS4-214ENST00000485842 NUDT9Q9BW91 350 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 ALOXE3Q9BYJ1 711 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 LHPPQ9H008 270 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 TUBB1Q9H4B7 451 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 MCM8Q9UJA3 840 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 TP53TG5Q9Y2B4 290 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 POLR3HQ9Y535 204 aaPredicted RBP11.1□□□□□ -0.63
HPS4-214ENST00000485842 CLDN16Q9Y5I7 305 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 FAM208BQ5VWN6 2430 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 DOCK10Q96BY6 2186 aa11.1□□□□□ -0.63
HPS4-214ENST00000485842 IGSF10Q6WRI0 2623 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 WASHC1A8K0Z3 465 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 K7EM74 188 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 GUCY1B2O75343 617 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 SEC22BO75396 215 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 CEACAM4O75871 244 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 MYO1DO94832 1006 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 SERPINA7P05543 415 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 FGF4P08620 206 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 ANXA4P09525 319 aaPredicted RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 ITGAMP11215 1152 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 ALDH9A1P49189 494 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 PGDP52209 483 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 SLC26A5P58743 744 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 TAS2R50P59544 299 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 RPL38P63173 70 aaKnown RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 RAE1P78406 368 aaKnown RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 FOLH1Q04609 750 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 MYBPC3Q14896 1274 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 PDCD2Q16342 344 aaPredicted RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 UGT3A2Q3SY77 523 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 GALNTL6Q49A17 601 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 LACTB2Q53H82 288 aaPredicted RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 MMP21Q8N119 569 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 SIRT6Q8N6T7 355 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 BRIX1Q8TDN6 353 aaKnown RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 TANKQ92844 425 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 UCN3Q969E3 161 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 ANKRD9Q96BM1 317 aaPredicted RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 SORT1Q99523 831 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 LRTM1Q9HBL6 345 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 ADAP2Q9NPF8 381 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 C5AR2Q9P296 337 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 RAP2CQ9Y3L5 183 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 PCDHGA9Q9Y5G4 932 aaKnown RBP11.09□□□□□ -0.63
HPS4-214ENST00000485842 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
HPS4-214ENST00000485842 PIEZO2Q9H5I5 2752 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 ATRXP46100 2492 aa11.08□□□□□ -0.64
HPS4-214ENST00000485842 SAGE2PA6NJ88 616 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms