RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PRKACGP22612 351 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 SLC6A12P48065 614 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 CCL11P51671 97 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 LIMK2P53671 638 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 GSCP56915 257 aaPredicted RBP4.31□□□□□ -1.72
SRRM1-213ENST00000485441 ABCE1P61221 599 aaKnown RBP4.31□□□□□ -1.72
SRRM1-213ENST00000485441 DHODHQ02127 395 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 FAM189A2Q15884 450 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 ZFP69Q49AA0 526 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 MPPE1Q53F39 396 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 WLSQ5T9L3 541 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 KIF6Q6ZMV9 814 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 TAF8Q7Z7C8 310 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 ZER1Q7Z7L7 766 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 ZNF329Q86UD4 541 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 KDM8Q8N371 416 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 NUP37Q8NFH4 326 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 OR9Q2Q8NGE9 314 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 OR6M1Q8NGM8 313 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 LIPHQ8WWY8 451 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 TAAR6Q96RI8 345 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 SYT15Q9BQS2 421 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 MED17Q9NVC6 651 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.31□□□□□ -1.72
SRRM1-213ENST00000485441 CNOT2Q9NZN8 540 aaKnown RBP4.31□□□□□ -1.72
SRRM1-213ENST00000485441 NARFQ9UHQ1 456 aa4.31□□□□□ -1.72
SRRM1-213ENST00000485441 MTF2Q9Y483 593 aaPredicted RBP4.31□□□□□ -1.72
SRRM1-213ENST00000485441 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 TMEM89A2RUT3 159 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 ARHGAP42A6NI28 874 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 YJEFN3A6XGL0 299 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 KPNA7A9QM74 516 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 EDIL3O43854 480 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 SOCS5O75159 536 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 MTRF1O75570 445 aaKnown RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 STAM2O75886 525 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 DUS4LO95620 317 aaKnown RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 MT-ATP6P00846 226 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 PDGFBP01127 241 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 TPBGLP0DKB5 382 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 CCDC192P0DO97 292 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 PDHA2P29803 388 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 AKT2P31751 481 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 SSTP61278 116 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 ERVK-16P61578 105 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 EXOSC7Q15024 291 aaKnown RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 ZNF528Q3MIS6 628 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 TEX35Q5T0J7 233 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 NEPROQ6NW34 567 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 CDHR3Q6ZTQ4 885 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 Q71RC1 249 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 OR2T6Q8NHC8 308 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 GOLGA5Q8TBA6 731 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 C16orf58Q96GQ5 468 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 CAPNS2Q96L46 248 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 NSMCE2Q96MF7 247 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 NSMCE3Q96MG7 304 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 USP28Q96RU2 1077 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 FUNDC2Q9BWH2 189 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 SPHK2Q9NRA0 654 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 ERRFI1Q9UJM3 462 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 DIMT1Q9UNQ2 313 aaKnown RBP4.3□□□□□ -1.72
SRRM1-213ENST00000485441 KLHDC2Q9Y2U9 406 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 CLCA3PQ9Y6N3 262 aa4.3□□□□□ -1.72
SRRM1-213ENST00000485441 KIF7Q2M1P5 1343 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 FAM205AQ6ZU69 1335 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 OR5H15A6NDH6 313 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 EEF2KO00418 725 aaKnown RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 B4GAT1O43505 415 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 CSO75390 466 aaKnown RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 B3GALNT1O75752 331 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 OR6A2O95222 327 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 PTBP3O95758 552 aaKnown RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 APRTP07741 180 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 FHP07954 510 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 ZCCHC18P0CG32 403 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 KRT5P13647 590 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 EZRP15311 586 aaKnown RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 FUT1P19526 365 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 PTPN4P29074 926 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 MARCKSP29966 332 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 ALDH3B1P43353 468 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 ZFP36L2P47974 494 aaKnown RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 MTHFSDQ2M296 383 aaKnown RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 CCDC40Q4G0X9 1142 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 RFTN2Q52LD8 501 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 TAF1BQ53T94 588 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 ISLR2Q6UXK2 745 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 SLC22A16Q86VW1 577 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 ZNF614Q8N883 585 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 PRSS33Q8NF86 280 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 PNPLA2Q96AD5 504 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 C14orf79Q96F83 325 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 RPGRIP1Q96KN7 1286 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 ALKBH3Q96Q83 286 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-213ENST00000485441 CBWD1Q9BRT8 395 aa4.29□□□□□ -1.72
SRRM1-213ENST00000485441 FTHL17Q9BXU8 183 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms