RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FBXO48Q5FWF7 155 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 PIGGQ5H8A4 983 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 DEPDC1Q5TB30 811 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 OPN5Q6U736 354 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 C3P1Q6ZMU1 363 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 C16orf47Q6ZP98 133 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-206ENST00000484733 SLC22A16Q86VW1 577 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 LILRB4Q8NHJ6 448 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 IL1RL2Q9HB29 575 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 IGSF5Q9NSI5 407 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 MS4A12Q9NXJ0 267 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 LRBAP50851 2863 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 OR14I1A6ND48 311 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 WWP2O00308 870 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 CDC40O60508 579 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCFD1-206ENST00000484733 IGFBP2P18065 325 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 TNNI3P19429 210 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 STT3AP46977 705 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 GUCY2DQ02846 1103 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 EMC4Q5J8M3 183 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 KHDRBS2Q5VWX1 349 aaKnown RBP10.62□□□□□ -0.71
SCFD1-206ENST00000484733 OR4C11Q6IEV9 310 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 GRHL2Q6ISB3 625 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 GK5Q6ZS86 529 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 ACAD11Q709F0 780 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF321PQ8N8H1 164 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 OR7G3Q8NG95 312 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 NUBPLQ8TB37 319 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 RND1Q92730 232 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 SCYL1Q96KG9 808 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 TTTY12Q9BZ98 90 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 DEFB127Q9H1M4 99 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 ALG9Q9H6U8 611 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 LIN28AQ9H9Z2 209 aaKnown RBP10.62□□□□□ -0.71
SCFD1-206ENST00000484733 PSD3Q9NYI0 1048 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 PDZD2O15018 2839 aa10.62□□□□□ -0.71
SCFD1-206ENST00000484733 BCKDKO14874 412 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 LDB3O75112 727 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 ETHE1O95571 254 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 LTA4HP09960 611 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 CPN2P22792 545 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 CHRNB4P30926 498 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 STX2P32856 288 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 PIK3CBP42338 1070 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 PLGLB1Q02325 96 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 TBL3Q12788 808 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 MEX3BQ6ZN04 569 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 TBC1D1Q86TI0 1168 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 ZCCHC7Q8N3Z6 543 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 SLC15A4Q8N697 577 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 RHEBL1Q8TAI7 183 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 TANKQ92844 425 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 OR8D2Q9GZM6 311 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 MCCC2Q9HCC0 563 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 SACM1LQ9NTJ5 587 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 OPTCQ9UBM4 332 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 PYCARDQ9ULZ3 195 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 RNF6Q9Y252 685 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 FOXO6A8MYZ6 492 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 TGFB1P01137 390 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 IGKV3-11P04433 115 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 COX7A2P14406 83 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 MAGEA4P43358 317 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 MRPS25P82663 173 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF750Q32MQ0 723 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 KBTBD12Q3ZCT8 623 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 LIPJQ5W064 366 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 CEP128Q6ZU80 1094 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 CTAGE3PQ8IX95 158 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 DND1Q8IYX4 353 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 FAM109AQ8N4B1 249 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 PPM1NQ8N819 430 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 CHTF18Q8WVB6 975 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 RGMAQ96B86 450 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 ART5Q96L15 291 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 SH2D2AQ9NP31 389 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 COPS7AQ9UBW8 275 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 PHF11Q9UIL8 331 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 UTP11Q9Y3A2 253 aaKnown RBP10.61□□□□□ -0.71
SCFD1-206ENST00000484733 CACNA1CQ13936 2221 aa10.61□□□□□ -0.71
SCFD1-206ENST00000484733 PHF3Q92576 2039 aaKnown RBP10.6□□□□□ -0.71
SCFD1-206ENST00000484733 FBN2P35556 2912 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 A0A087X1B8 175 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 MYOCOSA0A1B0GUC4 107 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 SYCE1LA8MT33 242 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 SUPT3HB4E1H0 165 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 RTCAO00442 366 aaKnown RBP10.6□□□□□ -0.71
SCFD1-206ENST00000484733 FGF17O60258 216 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 SUPT3HO75486 399 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 PDE9AO76083 593 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 PCNAP12004 261 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 MTHFD2P13995 350 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 EPB42P16452 691 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 GALNSP34059 522 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 SSR2P43308 183 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 TFF3Q07654 80 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 FOXO1Q12778 655 aa10.6□□□□□ -0.71
SCFD1-206ENST00000484733 ZNF791Q3KP31 576 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-206ENST00000484733 GXYLT1Q4G148 440 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms