RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ASPHQ12797 758 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 CRYMQ14894 314 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 TEDDM1Q5T9Z0 273 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 ABHD17CQ6PCB6 329 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 CLEC9AQ6UXN8 241 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 CXorf67Q86X51 503 aaPredicted RBP11.86□□□□□ -0.51
UBR4-213ENST00000483922 CNTN4Q8IWV2 1026 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 LRRC25Q8N386 305 aaPredicted RBP11.86□□□□□ -0.51
UBR4-213ENST00000483922 TBC1D19Q8N5T2 526 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 ANKRD9Q96BM1 317 aaPredicted RBP11.86□□□□□ -0.51
UBR4-213ENST00000483922 FAR2Q96K12 515 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 FAM167BQ9BTA0 163 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 ZNF703Q9H7S9 590 aaPredicted RBP11.86□□□□□ -0.51
UBR4-213ENST00000483922 B4GALT7Q9UBV7 327 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 CLCA3PQ9Y6N3 262 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 HSPB2A8KAH6 182 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 C17orf105B2RV13 164 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 TAPBPO15533 448 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 LRATO95237 230 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 P04436 131 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 EPXP11678 715 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 SLC6A12P48065 614 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 TRPC1P48995 793 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 ASCL1P50553 236 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 STXBP1P61764 594 aaKnown RBP11.85□□□□□ -0.51
UBR4-213ENST00000483922 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
UBR4-213ENST00000483922 HSPB2Q16082 182 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 MPEG1Q2M385 716 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 TMIGD1Q6UXZ0 262 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 ZNF793Q6ZN11 406 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 C9orf40Q8IXQ3 194 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 OR2L5Q8NG80 312 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 OR8K3Q8NH51 312 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 NEIL3Q8TAT5 605 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 DOK4Q8TEW6 326 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 PAQR8Q8TEZ7 354 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 ATL1Q8WXF7 558 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 DAZLQ92904 295 aaKnown RBP11.85□□□□□ -0.51
UBR4-213ENST00000483922 F2RL3Q96RI0 385 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 TIMP4Q99727 224 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 MAPKAP1Q9BPZ7 522 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 WDR83Q9BRX9 315 aaKnown RBP11.85□□□□□ -0.51
UBR4-213ENST00000483922 ACKR4Q9NPB9 350 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 JKAMPQ9P055 326 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 VWA7Q9Y334 891 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 DYRK1BQ9Y463 629 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 PCDHGB3Q9Y5G1 929 aa11.85□□□□□ -0.51
UBR4-213ENST00000483922 B3GALT2O43825 422 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 IGKV3-11P04433 115 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 HEXAP06865 529 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 ENO2P09104 434 aaPredicted RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 CD22P20273 847 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 ADSLP30566 484 aaPredicted RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 SOX18P35713 384 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 CRYZQ08257 329 aaKnown RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 KEAP1Q14145 624 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 ZNF460Q14592 562 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 BBS9Q3SYG4 887 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 ACSF3Q4G176 576 aaPredicted RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 PRAMEF20Q5VT98 475 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 SLC22A10Q63ZE4 541 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 TRMT10BQ6PF06 316 aaKnown RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 OPN5Q6U736 354 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 OR4N5Q8IXE1 308 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 VWA5B2Q8N398 1253 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 OR14A16Q8NHC5 309 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 ANKRD49Q8WVL7 239 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 MAIP1Q8WWC4 291 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 PPWD1Q96BP3 646 aaKnown RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 SERINC2Q96SA4 455 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 TRIM54Q9BYV2 358 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 REXO4Q9GZR2 422 aaKnown RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 ZFP64Q9NPA5 681 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 ZNF629Q9UEG4 869 aaPredicted RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 CNOT11Q9UKZ1 510 aaKnown RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 CHCHD2Q9Y6H1 151 aaPredicted RBP11.84□□□□□ -0.51
UBR4-213ENST00000483922 KCNE2Q9Y6J6 123 aa11.84□□□□□ -0.51
UBR4-213ENST00000483922 NPEPPSL1A6NEC2 478 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 WASHC1A8K0Z3 465 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 DVL2O14641 736 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 CLEC3AO75596 197 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 HRGP04196 525 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 PGAM1P18669 254 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 TNNI3P19429 210 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 PTMSP20962 102 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 TIMP3P35625 211 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 NKX6-1P78426 367 aaPredicted RBP11.83□□□□□ -0.52
UBR4-213ENST00000483922 DUSP8Q13202 625 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
UBR4-213ENST00000483922 POU4F3Q15319 338 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 FBXO48Q5FWF7 155 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 RNASEH2BQ5TBB1 312 aaKnown RBP11.83□□□□□ -0.52
UBR4-213ENST00000483922 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 TXLNBQ8N3L3 684 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 FBXW8Q8N3Y1 598 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 OR10G3Q8NGC4 313 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 OR5L2Q8NGL0 311 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms