RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TTLQ8NG68 377 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 POM121Q96HA1 1249 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 EXO5Q9H790 373 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 DNAJC11Q9NVH1 559 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 KCNN3Q9UGI6 736 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
VARS-226ENST00000483275 L3MBTL1Q9Y468 752 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 MED12Q93074 2177 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 A0A088AWK7 358 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 FIGNL2A6NMB9 653 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 KDM4EB2RXH2 506 aaPredicted RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 TP73O15350 636 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 FGF17O60258 216 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 CTNSO60931 367 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 IGHG3P01860 377 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 RFPL3SP0C7P2 107 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 EPORP19235 508 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 ZNF10P21506 573 aaPredicted RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 CNR1P21554 472 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 ASPHQ12797 758 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 PDIA2Q13087 525 aaKnown RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 MORF4L2Q15014 288 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 PAOXQ6QHF9 649 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 C9orf40Q8IXQ3 194 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 DAZLQ92904 295 aaKnown RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 ANKRD9Q96BM1 317 aaPredicted RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 GPATCH1Q9BRR8 931 aaKnown RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 PRDM7Q9NQW5 492 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 SACM1LQ9NTJ5 587 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 CCM2LQ9NUG4 571 aaPredicted RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 DNAJB12Q9NXW2 375 aaKnown RBP12.85□□□□□ -0.35
VARS-226ENST00000483275 VTI1BQ9UEU0 232 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 ACAD8Q9UKU7 415 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 ATG4BQ9Y4P1 393 aa12.85□□□□□ -0.35
VARS-226ENST00000483275 MPDZO75970 2070 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 CXorf49A8MYA2 514 aaPredicted RBP12.84□□□□□ -0.35
VARS-226ENST00000483275 BCKDKO14874 412 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 CCNT2O60583 730 aaKnown RBP12.84□□□□□ -0.35
VARS-226ENST00000483275 WISP3O95389 354 aaPredicted RBP12.84□□□□□ -0.35
VARS-226ENST00000483275 P04436 131 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 CCDC166P0CW27 439 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 PCNAP12004 261 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 MSH2P43246 934 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 TRPC1P48995 793 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 ARL4CP56559 192 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 DR1Q01658 176 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 CEBPEQ15744 281 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 PDK4Q16654 411 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 CES4AQ5XG92 561 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 GPSM1Q86YR5 675 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 MORN4Q8NDC4 146 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 ZNF721Q8TF20 911 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
VARS-226ENST00000483275 MCMBPQ9BTE3 642 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 CD274Q9NZQ7 290 aa12.84□□□□□ -0.35
VARS-226ENST00000483275 OR14I1A6ND48 311 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 LRRC3CA6NJW4 275 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 AQP7O14520 342 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 SEC31AO94979 1220 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 ATP5A1P25705 553 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 SSR2P43308 183 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 ZFP36L2P47974 494 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 KCNC1P48547 511 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 CHIT1Q13231 466 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 DDX39BQ13838 428 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 EFTUD2Q15029 972 aaKnown RBP eCLIP12.83□□□□□ -0.364e-7■■■■■ 44
VARS-226ENST00000483275 NDUFAF5Q5TEU4 345 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 OPN5Q6U736 354 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 CLYBLQ8N0X4 340 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 ACOT4Q8N9L9 421 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 GOLM1Q8NBJ4 401 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 ANKRD7Q92527 254 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 PTCD3Q96EY7 689 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 JSRP1Q96MG2 331 aaPredicted RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 GAL3ST4Q96RP7 486 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 MS4A8Q9BY19 250 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 POLDIP3Q9BY77 421 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 DERL2Q9GZP9 239 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 ZNF703Q9H7S9 590 aaPredicted RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 NT5DC2Q9H857 520 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 ZNF358Q9NW07 568 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 MOCS1Q9NZB8 636 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 GPRC5BQ9NZH0 403 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 PLEKHA6Q9Y2H5 1048 aa12.83□□□□□ -0.36
VARS-226ENST00000483275 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.83□□□□□ -0.36
VARS-226ENST00000483275 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms