RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SCYL2Q6P3W7 929 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 LRRC8BQ6P9F7 803 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 SYDE1Q6ZW31 735 aaPredicted RBP5.82□□□□□ -1.48
CHD6-209ENST00000482596 PRSS41Q7RTY9 318 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 SAMD14Q8IZD0 417 aaPredicted RBP5.82□□□□□ -1.48
CHD6-209ENST00000482596 ARHGEF39Q8N4T4 335 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 DDHD1Q8NEL9 900 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 CAVIN3Q969G5 261 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 MVB12AQ96EY5 273 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 WDYHV1Q96HA8 205 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 CITED1Q99966 193 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 SUCNR1Q9BXA5 334 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 RSPO3Q9BXY4 272 aaPredicted RBP5.82□□□□□ -1.48
CHD6-209ENST00000482596 STK33Q9BYT3 514 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 VPS16Q9H269 839 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 PDCL3Q9H2J4 239 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 COG4Q9H9E3 785 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 ADAP2Q9NPF8 381 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 DDX28Q9NUL7 540 aaKnown RBP5.82□□□□□ -1.48
CHD6-209ENST00000482596 LIMA1Q9UHB6 759 aaKnown RBP5.82□□□□□ -1.48
CHD6-209ENST00000482596 CIDEBQ9UHD4 219 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 SLC6A5Q9Y345 797 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 ATG4BQ9Y4P1 393 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 SNX5Q9Y5X3 404 aa5.82□□□□□ -1.48
CHD6-209ENST00000482596 A0A0U1RQJ8 604 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LRRC10BA6NIK2 292 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LRRC3CA6NJW4 275 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 SLC22A31A6NKX4 558 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 C2CD4BA6NLJ0 364 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 H0YGG7 62 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 CCDC159P0C7I6 412 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 PNMA6AP0CW24 399 aaPredicted RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 ERVK-10P10266 1014 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 HSD3B1P14060 373 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 CYP11B1P15538 503 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 OMGP23515 440 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 IL1R2P27930 398 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 AKT1P31749 480 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 SOX3P41225 446 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 XCR1P46094 333 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ARF3P61204 181 aaPredicted RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 RPL26P61254 145 aaKnown RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 RHAGQ02094 409 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 NIPAL4Q0D2K0 466 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 GALNT2Q10471 571 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 PWP1Q13610 501 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 RAB35Q15286 201 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LONRF2Q1L5Z9 754 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 IQCCQ4KMZ1 466 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LDLRAP1Q5SW96 308 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ERMARDQ5T6L9 678 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 INTS11Q5TA45 600 aaKnown RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 C11orf71Q6IPW1 123 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 DENND5AQ6IQ26 1287 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LEG1Q6P5S2 330 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ZNF449Q6P9G9 518 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LRFN4Q6PJG9 635 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 HDXQ7Z353 690 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 GALNT5Q7Z7M9 940 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 NT5DC3Q86UY8 548 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 PM20D2Q8IYS1 436 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 FAM71AQ8IYT1 594 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 LINC01356Q8N9X3 169 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 KCT2Q8NC54 265 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 TMEM35BQ8NCS4 154 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 NFAM1Q8NET5 270 aaPredicted RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 OR9A4Q8NGU2 314 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ARRDC2Q8TBH0 407 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 FAM71BQ8TC56 605 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 HM13Q8TCT9 377 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 GTF3AQ92664 365 aaKnown RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 ZBTB8AQ96BR9 441 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 MISP3Q96FF7 219 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 PGM2Q96G03 612 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ZNF830Q96NB3 372 aaPredicted RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 TUBA1CQ9BQE3 449 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 BPIFA3Q9BQP9 254 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 AARSD1Q9BTE6 412 aaKnown RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 CENPOQ9BU64 300 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 GPR63Q9BZJ6 419 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ACKR4Q9NPB9 350 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 IL26Q9NPH9 171 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 ZNF223Q9UK11 482 aaPredicted RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 FBXW2Q9UKT8 454 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 RPL26L1Q9UNX3 145 aaKnown RBP5.81□□□□□ -1.48
CHD6-209ENST00000482596 ZNF711Q9Y462 761 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 FAM169AQ9Y6X4 670 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 STARD9Q9P2P6 4700 aa5.81□□□□□ -1.48
CHD6-209ENST00000482596 TRBV11-1A0A0K0K1C0 115 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 PRAMEF27A3QJZ7 478 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 LGALS16A8MUM7 142 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 F8VZ95 297 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 EEF2KO00418 725 aaKnown RBP5.8□□□□□ -1.48
CHD6-209ENST00000482596 TIMM23O14925 209 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 OR2J2O76002 312 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 BAG2O95816 211 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 CYC1P08574 325 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 MSH3P20585 1137 aa5.8□□□□□ -1.48
CHD6-209ENST00000482596 TBXA2RP21731 343 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms