RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZFP28Q8NHY6 868 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 DNAJB14Q8TBM8 379 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PNPT1Q8TCS8 783 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 SELENOMQ8WWX9 145 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 NCSTNQ92542 709 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 ELMO1Q92556 727 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 DMRTA2Q96SC8 542 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 CCM2Q9BSQ5 444 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 C1orf50Q9BV19 199 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 KCNH6Q9H252 994 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 BRF2Q9HAW0 419 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 CLK4Q9HAZ1 481 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 TBC1D23Q9NUY8 699 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 CLEC4EQ9ULY5 219 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 AURKCQ9UQB9 309 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 POLR3HQ9Y535 204 aaPredicted RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 PTGDR2Q9Y5Y4 395 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 DNAH12Q6ZR08 3092 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 A0A087WXM4 84 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 EDDM13A0A1B0GTR0 161 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 TCRBV5S2A0A599 114 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ASPDHA6ND91 283 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 EVPLLA8MZ36 301 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 FAM220BPB1ANY3 271 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 H0YIV9 168 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 MOSPD3O75425 235 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RECQL5O94762 991 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 CSPG5O95196 566 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 H6PDO95479 791 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 DBHP09172 617 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ELFN1P0C7U0 828 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 MYF6P23409 242 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 MAPK3P27361 379 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 IL12AP29459 219 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 GKP32189 559 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 S100A3P33764 101 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 GRK5P34947 590 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RPL3P39023 403 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 CCR2P41597 374 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 PRLHRP49683 370 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RPS6KA3P51812 740 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 PPP5CP53041 499 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RPS14P62263 151 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 B4GALNT1Q00973 533 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 HSPA14Q0VDF9 509 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 SLC13A2Q13183 592 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 CAPRIN1Q14444 709 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 RAB39AQ14964 217 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 KIAA0040Q15053 153 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RFX4Q33E94 735 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 C2orf76Q3KRA6 126 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ANKDD1AQ495B1 522 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 BCL7AQ4VC05 210 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RFTN2Q52LD8 501 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 USP39Q53GS9 565 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 NHSL2Q5HYW2 709 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 LRIF1Q5T3J3 769 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 PLPP4Q5VZY2 271 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 FRG2Q64ET8 278 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ERICH5Q6P6B1 374 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 SHQ1Q6PI26 577 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 TECPR1Q7Z6L1 1165 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 LIX1Q8N485 282 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 TERB1Q8NA31 727 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ZNF540Q8NDQ6 660 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 OR2T12Q8NG77 320 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ITFG1Q8TB96 612 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 LKAAEAR1Q8TD35 194 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 SLC22A17Q8WUG5 538 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 SKA2Q8WVK7 121 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 OR8D1Q8WZ84 308 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 TFAP2CQ92754 450 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 GTF2H4Q92759 462 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 GLYATL1Q969I3 302 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 UBE2E3Q969T4 207 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RAB7BQ96AH8 199 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ESAMQ96AP7 390 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 VOPP1Q96AW1 172 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 BIRC7Q96CA5 298 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 CXorf40BQ96DE9 158 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RMND5BQ96G75 393 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 FCRL1Q96LA6 429 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 CNBD2Q96M20 576 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 FRG2BQ96QU4 278 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 OR52E6Q96RD3 313 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 SLC39A3Q9BRY0 314 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 YIPF3Q9GZM5 350 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 TP63Q9H3D4 680 aaPredicted RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 SLC6A20Q9NP91 592 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 PAPOLBQ9NRJ5 636 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 OLAHQ9NV23 265 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 DUS2Q9NX74 493 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 SIRT5Q9NXA8 310 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 TAS2R10Q9NYW0 307 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 PLA2G3Q9NZ20 509 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 NDUFAF4Q9P032 175 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 LPAR3Q9UBY5 353 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ZNF639Q9UID6 485 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms