RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 AKAP7Q9P0M2 348 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 HMG20BQ9P0W2 317 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 TRMT6Q9UJA5 497 aaKnown RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 A0A0J9YWU9 116 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF724A8MTY0 619 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 E9PQ18 207 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 CSO75390 466 aaKnown RBP4.66□□□□□ -1.66
SF3B1-210ENST00000482158 OR6B1O95007 311 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 MT-ND3P03897 115 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 LYNP07948 512 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 ABHD2P08910 425 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 GSTA2P09210 222 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 PRELPP51888 382 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 MS4A18Q3C1V0 323 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 GLIPR1L2Q4G1C9 344 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF343Q6P1L6 599 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 RABEPKQ7Z6M1 372 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 ITIH5Q86UX2 942 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 PEX5LQ8IYB4 626 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 SLCO4A1Q96BD0 722 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 SLC45A3Q96JT2 553 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF560Q96MR9 790 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 RAB40CQ96S21 281 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 TRIM15Q9C019 465 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 TMEM245Q9H330 911 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 DCLRE1BQ9H816 532 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 GPN1Q9HCN4 374 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-210ENST00000482158 PIGVQ9NUD9 493 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 MUTYHQ9UIF7 546 aa4.66□□□□□ -1.66
SF3B1-210ENST00000482158 TDRKHQ9Y2W6 561 aaKnown RBP4.66□□□□□ -1.66
SF3B1-210ENST00000482158 FER1L5A0AVI2 2057 aa4.65□□□□□ -1.66
SF3B1-210ENST00000482158 IGLV4-3A0A075B6K6 122 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 A0A1B0GU03 582 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 A0A1W2PPR1 153 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 ASB14A6NK59 587 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 OGTO15294 1046 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 GMNNO75496 209 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 FHP07954 510 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CD1DP15813 335 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 ZFP36L2P47974 494 aaKnown RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CNN1P51911 297 aaKnown RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 KCNK10P57789 538 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 RPL27P61353 136 aaKnown RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 RPS27AP62979 156 aaKnown RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 HERV-K104P63124 156 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 GFPT1Q06210 699 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 SNAI3Q3KNW1 292 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 ZNF730Q6ZMV8 503 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 TOM1L2Q6ZVM7 507 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 MCM10Q7L590 875 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 OR6F1Q8NGZ6 308 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 SPPL2AQ8TCT8 520 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CHPT1Q8WUD6 406 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CXorf58Q96LI9 332 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 RBM4BQ9BQ04 359 aaKnown RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 JPH2Q9BR39 696 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 FAM213AQ9BRX8 229 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 TRIM51Q9BSJ1 452 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CCDC28BQ9BUN5 200 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CARD9Q9H257 536 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 MARCH7Q9H992 704 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 WDR41Q9HAD4 459 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 UBE2TQ9NPD8 197 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-210ENST00000482158 CTSZQ9UBR2 303 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 FETUBQ9UGM5 382 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 TEKT2Q9UIF3 430 aa4.65□□□□□ -1.67
SF3B1-210ENST00000482158 BCAS2O75934 225 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-210ENST00000482158 OR6A2O95222 327 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 PCP11498 1178 aaKnown RBP4.64□□□□□ -1.67
SF3B1-210ENST00000482158 FCARP24071 287 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 ETV5P41161 510 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 NDUFV3P56181 108 aaKnown RBP4.64□□□□□ -1.67
SF3B1-210ENST00000482158 HSPA14Q0VDF9 509 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 ENPP2Q13822 863 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 PRAMEF7Q5VXH5 474 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 C1orf186Q6ZWK4 172 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 Q8N377 158 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 ZNRF1Q8ND25 227 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 MRPL24Q96A35 216 aaKnown RBP4.64□□□□□ -1.67
SF3B1-210ENST00000482158 EEF2KMTQ96G04 330 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 GPR137Q96N19 417 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 GANQ9H2C0 597 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 THAP9Q9H5L6 903 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 ACOXLQ9NUZ1 547 aa4.64□□□□□ -1.67
SF3B1-210ENST00000482158 NIP7Q9Y221 180 aaKnown RBP eCLIP4.64□□□□□ -1.67
SF3B1-210ENST00000482158 A8MXK9 166 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 FBP2O00757 339 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 PI15O43692 258 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 PRDM1O75626 825 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 TPBGLP0DKB5 382 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 AREGP15514 252 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 FERP16591 822 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 STIP1P31948 543 aaKnown RBP4.63□□□□□ -1.67
SF3B1-210ENST00000482158 ID1P41134 155 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 MTIF2P46199 727 aaKnown RBP4.63□□□□□ -1.67
SF3B1-210ENST00000482158 PITPNBP48739 271 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 NT5C2P49902 561 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 ATP4BP51164 291 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 GALK2Q01415 458 aa4.63□□□□□ -1.67
SF3B1-210ENST00000482158 PAX8Q06710 450 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms