RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MITFO75030 526 aaPredicted RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 BCAS1O75363 584 aaPredicted RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 FABP3P05413 133 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 GPR89BP0CG08 455 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 PTX3P26022 381 aaPredicted RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 PKLRP30613 574 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 DNAJA1P31689 397 aaKnown RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 KDELR2P33947 212 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 MRPS21P82921 87 aaKnown RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 GAS6Q14393 721 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 RGNQ15493 299 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 SLC5A12Q1EHB4 618 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 ZNF793Q6ZN11 406 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 SLC16A12Q6ZSM3 486 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 LSRQ86X29 649 aaPredicted RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 ANKRD13BQ86YJ7 626 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 STARD8Q92502 1023 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 MIEF1Q9NQG6 463 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 EXD2Q9NVH0 621 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 CA14Q9ULX7 337 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 TPRKBQ9Y3C4 175 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 NDUFS2O75306 463 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 HNRNPCP07910 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHD3-211ENST00000481999 ALPPL2P10696 532 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 FPR1P21462 350 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 HNRNPA2B1P22626 353 aaKnown RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 HTR1BP28222 390 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 TEAD1P28347 426 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 SOAT1P35610 550 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 MAPK12P53778 367 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 REEP5Q00765 189 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 NFATC4Q14934 902 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 KDM4DQ6B0I6 523 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 Q6ZSR6 202 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 GALNT5Q7Z7M9 940 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 EGFL6Q8IUX8 553 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 CNIH3Q8TBE1 160 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 COX4I2Q96KJ9 171 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 SLC35A5Q9BS91 424 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 ASPSCR1Q9BZE9 553 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 RIBC2Q9H4K1 309 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 MRPS30Q9NP92 439 aaKnown RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 MMP17Q9ULZ9 603 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 MYO1GB0I1T2 1018 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 GCM2O75603 506 aaPredicted RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 INMTO95050 263 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SEMG1P04279 462 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 IGHV4-34P06331 123 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 GP2P55259 537 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 C21orf58P58505 322 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 CXCR4P61073 352 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 VLDLRP98155 873 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SPCS2Q15005 226 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 ALG11Q2TAA5 492 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 USP30Q70CQ3 517 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 CEP68Q76N32 757 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 CAMKMTQ7Z624 323 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SLC15A4Q8N697 577 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 OR2L3Q8NG85 312 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 EXOSC8Q96B26 276 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 TPD52L3Q96J77 140 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 APOL4Q9BPW4 351 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 CHST8Q9H2A9 424 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 IRAK4Q9NWZ3 460 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 B3GNT3Q9Y2A9 372 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 ISM1B1AKI9 464 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 RNASET2O00584 256 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 XPNPEP2O43895 674 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 NME6O75414 186 aaPredicted RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 SEMA4FO95754 770 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 TFPTP0C1Z6 253 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 JUNDP17535 347 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 FUT4P22083 530 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SLC19A1P41440 591 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 DAPP51397 102 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 EMX1Q04741 257 aaPredicted RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 HSPB3Q12988 150 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 AQP6Q13520 282 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 PDE7AQ13946 482 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SIM2Q14190 667 aaPredicted RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 LRRC32Q14392 662 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 ZNF750Q32MQ0 723 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 EIF3MQ7L2H7 374 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 RNF130Q86XS8 419 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 CREB3L4Q8TEY5 395 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SNRNP27Q8WVK2 155 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 RORBQ92753 470 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 TM4SF18Q96CE8 201 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 TOE1Q96GM8 510 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 SCARF2Q96GP6 870 aaPredicted RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 METTL2AQ96IZ6 378 aaKnown RBP13.73□□□□□ -0.21
CHD3-211ENST00000481999 RHBGQ9H310 441 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 MYNNQ9NPC7 610 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 ATP6V1HQ9UI12 483 aa13.73□□□□□ -0.21
CHD3-211ENST00000481999 NDUFS4O43181 175 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 JRKO75564 520 aa13.72□□□□□ -0.21
CHD3-211ENST00000481999 RAB8AP61006 207 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms