RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TBX6O95947 436 aaPredicted RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 B3GALT4O96024 378 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ALDOAP04075 364 aaKnown RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 ABHD2P08910 425 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 MTHFD2P13995 350 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 EPORP19235 508 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 CD22P20273 847 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 MST1P26927 711 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 GALNSP34059 522 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 MAGEA12P43365 314 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 STT3AP46977 705 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 GPR143P51810 404 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 CCNG1P51959 295 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 NAA20P61599 178 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 SLC7A5Q01650 507 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 IFT88Q13099 833 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 MPEG1Q2M385 716 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 GGTA1PQ4G0N0 100 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ARHGAP11AQ6P4F7 1023 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 RTL4Q6ZR62 310 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 SLC22A16Q86VW1 577 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 IFT20Q8IY31 132 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ST13P4Q8IZP2 240 aaPredicted RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 L3MBTL4Q8NA19 623 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ZFP62Q8NB50 900 aaPredicted RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 MYRIPQ8NFW9 859 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 C16orf52Q8NHV5 167 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 SLC2A12Q8TD20 617 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 KCTD4Q8WVF5 259 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ZNF592Q92610 1267 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ESAMQ96AP7 390 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 PAFAH2Q99487 392 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 MRPL57Q9BQC6 102 aaKnown RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 AICDAQ9GZX7 198 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 VPS11Q9H270 941 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 CDC42EP4Q9H3Q1 356 aaKnown RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 NINJ2Q9NZG7 142 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 COQ3Q9NZJ6 369 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 KCMF1Q9P0J7 381 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 CPSF2Q9P2I0 782 aaKnown RBP10.66□□□□□ -0.7
CCM2-213ENST00000480658 FETUBQ9UGM5 382 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ADAM29Q9UKF5 820 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 NFU1Q9UMS0 254 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 SPTAN1Q13813 2472 aaKnown RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 A0A0G2JN53 185 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 EXOC1LA0A1B0GW35 172 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 CCDC151A5D8V7 595 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 PRSS44E7EML9 344 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 NPIPA5E9PKD4 350 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 E9PLN8 166 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 OR2J2O76002 312 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 ACSL3O95573 720 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 OTCP00480 354 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TGFB1P01137 390 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 SNRPAP09012 282 aaKnown RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 NR2F6P10588 404 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TAC1P20366 129 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 DCTP40126 519 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TMED10P49755 219 aaKnown RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 MEOX1P50221 254 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 IGLV3-21P80748 117 aaPredicted RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 PMP22Q01453 160 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 DLG1Q12959 904 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 SLAMF1Q13291 335 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 DDX39BQ13838 428 aaKnown RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 SPRED3Q2MJR0 410 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TECRLQ5HYJ1 363 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TTC19Q6DKK2 380 aaPredicted RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 TMEM211Q6ICI0 200 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 OR52E8Q6IFG1 317 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 SLC29A4Q7RTT9 530 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 CLNKQ7Z7G1 428 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 MRGPRGQ86SM5 289 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 SIAH3Q8IW03 269 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 PSD4Q8NDX1 1056 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 TRIM44Q96DX7 344 aaPredicted RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 CCDC120Q96HB5 630 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 FBXL20Q96IG2 436 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 CSF3RQ99062 836 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 NTMT1Q9BV86 223 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 SHCBP1LQ9BZQ2 653 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 OR8D2Q9GZM6 311 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 MRPL46Q9H2W6 279 aaKnown RBP10.65□□□□□ -0.7
CCM2-213ENST00000480658 ELOVL6Q9H5J4 265 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 PPCSQ9HAB8 311 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 NPIPA1Q9UND3 350 aa10.65□□□□□ -0.7
CCM2-213ENST00000480658 UNC79Q9P2D8 2635 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 SCN2AQ99250 2005 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 IQANK1A0A1B0GTG1 560 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 OR14I1A6ND48 311 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 ENO4A6NNW6 628 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 A8MUA0 341 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 FAM47E-STBD1D6RA91 191 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 PLPP1O14494 284 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 PEX1O43933 1283 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 OR10H2O60403 315 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms