RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 LINC00469Q8N7U9 141 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 GEMIN6Q8WXD5 167 aaKnown RBP10.18□□□□□ -0.78
SIK3-210ENST00000480468 SMG7Q92540 1137 aaKnown RBP10.18□□□□□ -0.78
SIK3-210ENST00000480468 GTPBP3Q969Y2 492 aaKnown RBP10.18□□□□□ -0.78
SIK3-210ENST00000480468 SLC6A18Q96N87 628 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 TMEM175Q9BSA9 504 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 SYT17Q9BSW7 474 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 WACQ9BTA9 647 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 ZNF416Q9BWM5 594 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 TSSK6Q9BXA6 273 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 SLC6A17Q9H1V8 727 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 OR51J1Q9H342 316 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 FLRT1Q9NZU1 646 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 FKBPLQ9UIM3 349 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 BTNL2Q9UIR0 455 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 HACL1Q9UJ83 578 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 SCP2D1Q9UJQ7 156 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 ACTL7AQ9Y615 435 aa10.18□□□□□ -0.78
SIK3-210ENST00000480468 TRDV1A0A1B0GX56 115 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 GTPBP1O00178 669 aaKnown RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 PTGESO14684 152 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 PTP4A3O75365 173 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 STK16O75716 305 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 SNAPC5O75971 98 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 RAB36O95755 333 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 SLC25A27O95847 323 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 OSMP13725 252 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 GABRA5P31644 462 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 ZRANB3Q5FWF4 1079 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CDKL4Q5MAI5 379 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 SLC25A30Q5SVS4 291 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 NOXRED1Q6NXP6 359 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 RRM2BQ7LG56 351 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 GPR65Q8IYL9 337 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 DNAJC5GQ8N7S2 189 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 UXS1Q8NBZ7 420 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 OR2T4Q8NH00 348 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CEP76Q8TAP6 659 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 EMID1Q96A84 441 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 OTUB1Q96FW1 271 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 IL4I1Q96RQ9 567 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 MGME1Q9BQP7 344 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 PCDHB16Q9NRJ7 776 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 DNAJC27Q9NZQ0 273 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 MALT1Q9UDY8 824 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 NUBP2Q9Y5Y2 271 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 NPTNQ9Y639 398 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 SPIN1Q9Y657 262 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 NUP214P35658 2090 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 KCNE1BA0A087WTH5 132 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 TMEM129A0AVI4 362 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 PIPSLA2A3N6 862 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 PRAMEF25A6NGN4 478 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 A8MXK9 166 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 H3BRB1 525 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 PSIP1O75475 530 aaKnown RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 GADD45GO95257 159 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CPSF4O95639 269 aaKnown RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 TGM6O95932 706 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CFDP00746 253 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 HMGN1P05114 100 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 ZNF286BP0CG31 522 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 POU2F1P14859 743 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 DGKAP23743 735 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 DNASE1P24855 282 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 AQP1P29972 269 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 GSTM5P46439 218 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 RAG2P55895 527 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 WNT4P56705 351 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CXCL9Q07325 125 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 RBBP4Q09028 425 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CPSF6Q16630 551 aaKnown RBP eCLIP10.17□□□□□ -0.78
SIK3-210ENST00000480468 DUSP6Q16828 381 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 CRTC2Q53ET0 693 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 MS4A13Q5J8X5 152 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 NHLRC3Q5JS37 347 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 RETSATQ6NUM9 610 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 SCD5Q86SK9 330 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 SCAMP5Q8TAC9 235 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 ACOT12Q8WYK0 555 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 HERVK_113Q902F9 699 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 C1GALT1C1Q96EU7 318 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 APIPQ96GX9 242 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 APOLD1Q96LR9 279 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 MROH8Q9H579 483 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 NMNAT1Q9HAN9 279 aaPredicted RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 PDFQ9HBH1 243 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 KCND3Q9UK17 655 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 LIPT1Q9Y234 373 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 PIN4Q9Y237 131 aaKnown RBP10.17□□□□□ -0.78
SIK3-210ENST00000480468 ENPP4Q9Y6X5 453 aa10.17□□□□□ -0.78
SIK3-210ENST00000480468 ARPC4-TTLL3A0A0A6YYG9 625 aa10.16□□□□□ -0.78
SIK3-210ENST00000480468 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
SIK3-210ENST00000480468 IQCF5A8MTL0 148 aa10.16□□□□□ -0.78
SIK3-210ENST00000480468 M0R233 179 aa10.16□□□□□ -0.78
SIK3-210ENST00000480468 AGRPO00253 132 aa10.16□□□□□ -0.78
SIK3-210ENST00000480468 CASKO14936 926 aa10.16□□□□□ -0.78
SIK3-210ENST00000480468 PRKYO43930 277 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms