RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 GCNT6Q5T4J0 391 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 LILRA3Q8N6C8 439 aaPredicted RBP9.47□□□□□ -0.89
RERE-213ENST00000480342 IQCF1Q8N6M8 205 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 C9orf43Q8TAL5 461 aaPredicted RBP9.47□□□□□ -0.89
RERE-213ENST00000480342 FRMD6Q96NE9 622 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 SLC22A12Q96S37 553 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 TAPBPLQ9BX59 468 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 ASAH2Q9NR71 780 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 CLEC4EQ9ULY5 219 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 FADS2P1A8MWK0 482 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 B4DXG7 233 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 TLR4O00206 839 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 MEN1O00255 615 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 TSC22D2O75157 780 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 C8GP07360 202 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 HBQ1P09105 142 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 CSF3P09919 207 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 PSKH1P11801 424 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 TNNI3P19429 210 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 MAPK8P45983 427 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 HNMTP50135 292 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 AP1S1P61966 158 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 RPS13P62277 151 aaKnown RBP9.47□□□□□ -0.89
RERE-213ENST00000480342 CDK6Q00534 326 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 LARS2Q15031 903 aaKnown RBP9.47□□□□□ -0.89
RERE-213ENST00000480342 GPR33Q49SQ1 333 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 USP30Q70CQ3 517 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 HTR3DQ70Z44 454 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 TCEANCQ8N8B7 351 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 YIPF7Q8N8F6 280 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 SIMC1Q8NDZ2 872 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 HUS1BQ8NHY5 278 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 SETD6Q8TBK2 473 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 ENKURQ8TC29 256 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 SCAMP4Q969E2 229 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 RNF170Q96K19 258 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 GFM1Q96RP9 751 aaKnown RBP9.47□□□□□ -0.89
RERE-213ENST00000480342 BRD9Q9H8M2 597 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 IL21Q9HBE4 155 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 COMMD3Q9UBI1 195 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 SSR3Q9UNL2 185 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 TRAPPC4Q9Y296 219 aa9.47□□□□□ -0.89
RERE-213ENST00000480342 A0A0G2JMP0 313 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 OR10H3O60404 316 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 KIR2DL3P43628 341 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 PREPP48147 710 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 MVDP53602 400 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 MEF2AQ02078 507 aaPredicted RBP9.46□□□□□ -0.89
RERE-213ENST00000480342 PTSQ03393 145 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 CHRNEQ04844 493 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 LYPLAL1Q5VWZ2 237 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 METTL2BQ6P1Q9 378 aaKnown RBP9.46□□□□□ -0.89
RERE-213ENST00000480342 C19orf48Q6RUI8 117 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 VN1R5Q7Z5H4 357 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 HMGN2P46Q86SG4 172 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 TMC8Q8IU68 726 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 MMP21Q8N119 569 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 SYT14Q8NB59 555 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 FAM46DQ8NEK8 389 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 ATP6V1C2Q8NEY4 427 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 WDR20Q8TBZ3 569 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 OTUB2Q96DC9 234 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 CORO2BQ9UQ03 480 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 CARD8Q9Y2G2 431 aa9.46□□□□□ -0.89
RERE-213ENST00000480342 PCM1Q15154 2024 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.9
RERE-213ENST00000480342 ZSCAN5BA6NJL1 495 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 ZAR1LA6NP61 321 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 FAM25AB3EWG3 89 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 FAM25CB3EWG5 89 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 FAM25GB3EWG6 89 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 SH3BP5O60239 455 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 TGFB1P01137 390 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 C1SP09871 688 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 CBSLP0DN79 551 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 LHCGRP22888 699 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 CSTF2P33240 577 aaKnown RBP eCLIP9.46□□□□□ -0.91e-6■■□□□ 13.4
RERE-213ENST00000480342 SDC2P34741 201 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 GPC1P35052 558 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 CBSP35520 551 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 CSNK1DP48730 415 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
RERE-213ENST00000480342 ARHGAP15Q53QZ3 475 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 YIF1BQ5BJH7 314 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 ANXA8L1Q5VT79 327 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 LSRQ86X29 649 aaPredicted RBP9.46□□□□□ -0.9
RERE-213ENST00000480342 MEX3DQ86XN8 651 aaKnown RBP9.46□□□□□ -0.9
RERE-213ENST00000480342 ZFP41Q8N8Y5 198 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 KLHL6Q8WZ60 621 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 C1GALT1C1Q96EU7 318 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 TMEM80Q96HE8 168 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 RNF121Q9H920 327 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 SPATA6Q9NWH7 488 aaPredicted RBP9.46□□□□□ -0.9
RERE-213ENST00000480342 TVP23BQ9NYZ1 205 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 DKK3Q9UBP4 350 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 ZNF282Q9UDV7 671 aaPredicted RBP9.46□□□□□ -0.9
RERE-213ENST00000480342 FTSJ1Q9UET6 329 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 STUB1Q9UNE7 303 aa9.46□□□□□ -0.9
RERE-213ENST00000480342 EXO1Q9UQ84 846 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms