RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TWIST2Q8WVJ9 160 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 MIEF2Q96C03 454 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 KCNC2Q96PR1 638 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 SERINC2Q96SA4 455 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 BARD1Q99728 777 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 TBCDQ9BTW9 1192 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 ILKAPQ9H0C8 392 aaPredicted RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 TUBB1Q9H4B7 451 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 ZBTB20Q9HC78 741 aaPredicted RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 MED4Q9NPJ6 270 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 ASF1BQ9NVP2 202 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 PNPOQ9NVS9 261 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 MARCOQ9UEW3 520 aaPredicted RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 DNAJC15Q9Y5T4 150 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 CNTRLQ7Z7A1 2325 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 TACC2O95359 2948 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 CPAMD8Q8IZJ3 1885 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 A0A088AWK7 358 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 ARHGAP10A1A4S6 786 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 DPM1O60762 260 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 B4GALT2O60909 372 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 DDAH2O95865 285 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 ONECUT2O95948 504 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 JUNP05412 331 aaKnown RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 KLK1P06870 262 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 FGF4P08620 206 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 ZGLP1P0C6A0 271 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 RNH1P13489 461 aaKnown RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 ZNF10P21506 573 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 HIST1H1TP22492 207 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 OTX2P32243 289 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 RPL14P50914 215 aaKnown RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 SKP1P63208 163 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 KLC1Q07866 573 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 TBL3Q12788 808 aaKnown RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 PDCD2Q16342 344 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 UGT3A2Q3SY77 523 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MINDY4Q4G0A6 757 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 C10orf62Q5T681 223 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MED25Q71SY5 747 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MAMDC2Q7Z304 686 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 COMMD6Q7Z4G1 85 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MRGPREQ86SM8 312 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 NUDT13Q86X67 352 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 ZC3H7AQ8IWR0 971 aaKnown RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 GBP7Q8N8V2 638 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 TMEM102Q8N9M5 508 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 FAM47BQ8NA70 645 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 OR2T11Q8NH01 316 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 RAB3IL1Q8TBN0 382 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 LRRC8CQ8TDW0 803 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 FKBP10Q96AY3 582 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 APIPQ96GX9 242 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MAPKAP1Q9BPZ7 522 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 EBPLQ9BY08 206 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 ZNF717Q9BY31 904 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 ROGDIQ9GZN7 287 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 ZNF552Q9H707 407 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 BRF2Q9HAW0 419 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MKKSQ9NPJ1 570 aaPredicted RBP8.52□□□□□ -1.05
VCP-206ENST00000480327 THAP1Q9NVV9 213 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 NMRK1Q9NWW6 199 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 PSD3Q9NYI0 1048 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 GPR83Q9NYM4 423 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 VPS29Q9UBQ0 182 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 GIMAP2Q9UG22 337 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MKL2Q9ULH7 1088 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 PADI2Q9Y2J8 665 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 CSAG2Q9Y5P2 127 aa8.52□□□□□ -1.05
VCP-206ENST00000480327 MYOCOSA0A1B0GUC4 107 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 ATP6AP2A0A1C7CYW4 349 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 PSMD12O00232 456 aaPredicted RBP8.51□□□□□ -1.05
VCP-206ENST00000480327 SLC28A1O00337 649 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 RGS14O43566 566 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 TMPRSS11DO60235 418 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 SNNO75324 88 aaPredicted RBP8.51□□□□□ -1.05
VCP-206ENST00000480327 SEC22BO75396 215 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 PRKRAO75569 313 aaKnown RBP8.51□□□□□ -1.05
VCP-206ENST00000480327 ATP6AP2O75787 350 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 BMP10O95393 424 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 ALBP02768 609 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 HEXBP07686 556 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 UMODP07911 640 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 HSD3B1P14060 373 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 CPN2P22792 545 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 HSD3B2P26439 372 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 TPP2P29144 1249 aaPredicted RBP8.51□□□□□ -1.05
VCP-206ENST00000480327 HNRNPFP52597 415 aaKnown RBP8.51□□□□□ -1.05
VCP-206ENST00000480327 LIM2P55344 173 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 HNRNPH2P55795 449 aaKnown RBP8.51□□□□□ -1.05
VCP-206ENST00000480327 RAB38P57729 211 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 BTG2P78543 158 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 OCRLQ01968 901 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 GALNTL6Q49A17 601 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 CCNYL2Q5T2Q4 361 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 NIPAL1Q6NVV3 410 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 CYP20A1Q6UW02 462 aa8.51□□□□□ -1.05
VCP-206ENST00000480327 IGFL3Q6UXB1 125 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms