RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PHF21AQ96BD5 680 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 ZNF382Q96SR6 550 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 FAM129BQ96TA1 746 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 KXD1Q9BQD3 176 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 CPPED1Q9BRF8 314 aaPredicted RBP12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 HPF1Q9NWY4 346 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 SLC25A37Q9NYZ2 338 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 NLKQ9UBE8 527 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 RNF112Q9ULX5 631 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 NDRG2Q9UN36 371 aaKnown RBP12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 SSR3Q9UNL2 185 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 MRPS7Q9Y2R9 242 aaKnown RBP12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
CNKSR3-204ENST00000479339 A0A1B0GVI7 797 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 A0A1W2PQL4 384 aaPredicted RBP12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 F8W036 122 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 KLK8O60259 260 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 MPZL2O60487 215 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 S1PR4O95977 384 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 VIPP01282 170 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 FCARP24071 287 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 STOMP27105 288 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 SDC2P34741 201 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 FGFBP1Q14512 234 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 RBBP7Q16576 425 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 SLC39A12Q504Y0 691 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 Q6ZSR9 355 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 PIM3Q86V86 326 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 SLC9A6Q92581 669 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 UCN3Q969E3 161 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 YIPF5Q969M3 257 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 MYLPFQ96A32 169 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM149B1Q96BN6 582 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 ZBED6CLQ96FA7 236 aaPredicted RBP12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 WBP1Q96G27 269 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 PPP3R2Q96LZ3 170 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 RBP7Q96R05 134 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 OR5M11Q96RB7 305 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 C12orf57Q99622 126 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 DPCDQ9BVM2 203 aaPredicted RBP12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 TBC1D17Q9HA65 648 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 ENOPH1Q9UHY7 261 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 PCTPQ9UKL6 214 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 CLCA3PQ9Y6N3 262 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 SCN1AP35498 2009 aa12.58□□□□□ -0.4
CNKSR3-204ENST00000479339 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 M0QYT0 321 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 SNAPC5O75971 98 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 FGF19O95750 216 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF682O95780 498 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CYP17A1P05093 508 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CRISP3P54108 245 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ALDH6A1Q02252 535 aaKnown RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TSNQ15631 228 aaKnown RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM78AQ5JUQ0 283 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 LRIF1Q5T3J3 769 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 NADSYN1Q6IA69 706 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TANGO2Q6ICL3 276 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 LRFN4Q6PJG9 635 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 RANBP10Q6VN20 620 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CDH26Q8IXH8 852 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 SLC34A3Q8N130 599 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TMEM86AQ8N2M4 240 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TTC9BQ8N6N2 239 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 PSMG2Q969U7 264 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ASB16Q96NS5 453 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 MYOCQ99972 504 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 PLA2G2FQ9BZM2 168 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 DERL2Q9GZP9 239 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 SP110Q9HB58 689 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TRPV4Q9HBA0 871 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 HHATLQ9HCP6 504 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 SLC35C2Q9NQQ7 365 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 SDHAF2Q9NX18 166 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 POLR3HQ9Y535 204 aaPredicted RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CDH10Q9Y6N8 788 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF638Q14966 1978 aaKnown RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TRAV19A0A0A6YYK7 116 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 C7orf66A4D0T2 115 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 LALBAP00709 142 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ESR1P03372 595 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 FHP07954 510 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CKMT1AP12532 417 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CRYBB2P43320 205 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 INPP1P49441 399 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 STARD6P59095 220 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 DMC1Q14565 340 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF628Q5EBL2 1059 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 CD276Q5ZPR3 534 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 PLAG1Q6DJT9 500 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 IL31Q6EBC2 164 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF704Q6ZNC4 412 aaPredicted RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 LRRTM3Q86VH5 581 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms