RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 IFNA16P05015 189 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 FAM58BPP0C7Q3 252 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 CPA3P15088 417 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 TNFSF10P50591 281 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 PKNOX1P55347 436 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 TAS2R50P59544 299 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 DNAJB13P59910 316 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 TNFRSF17Q02223 184 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 KCNC4Q03721 635 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 TERF2Q15554 542 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 ELAVL1Q15717 326 aaKnown RBP14.56□□□□□ -0.08
HMGA1-206ENST00000478214 CYP20A1Q6UW02 462 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 BEST3Q8N1M1 668 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 SLC5A8Q8N695 610 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 BANPQ8N9N5 519 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 APCDD1LQ8NCL9 501 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 OR1N1Q8NGS0 311 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 APOPT1Q96IL0 206 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 KCNA7Q96RP8 456 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 TMEM109Q9BVC6 243 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 SLC29A3Q9BZD2 475 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 RNF32Q9H0A6 362 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.56□□□□□ -0.084e-6■■■■□ 20.4
HMGA1-206ENST00000478214 CDCP1Q9H5V8 836 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 RPF2Q9H7B2 306 aaKnown RBP14.56□□□□□ -0.08
HMGA1-206ENST00000478214 MKS1Q9NXB0 559 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 MAP10Q9P2G4 905 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 VTI1BQ9UEU0 232 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 RELNP78509 3460 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 UBR5O95071 2799 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 A0A1W2PR48 441 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 OR5H15A6NDH6 313 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 GLOD5A6NK44 160 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 WASHC1A8K0Z3 465 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 UBFD1O14562 309 aaKnown RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 SPAG7O75391 227 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 AIFM1O95831 613 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 KRT6AP02538 564 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 KRT6BP04259 564 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 KLK1P06870 262 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 TPP2P29144 1249 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 HMOX2P30519 316 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 TLX1P31314 330 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 BUD31P41223 144 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 KRT6CP48668 564 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 HTR6P50406 440 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 TBL3Q12788 808 aaKnown RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 SERTAD2Q14140 314 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 MEP1AQ16819 746 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 COMMD6Q7Z4G1 85 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 RPS19BP1Q86WX3 136 aaKnown RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 METTL4Q8N3J2 472 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 TMEM132CQ8N3T6 1108 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 AGAP11Q8TF27 550 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 PTPMT1Q8WUK0 201 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 UCN3Q969E3 161 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 NCLNQ969V3 563 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 DEFB126Q9BYW3 111 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 BRF2Q9HAW0 419 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 MID1IP1Q9NPA3 183 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 ASF1BQ9NVP2 202 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 OXSMQ9NWU1 459 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 AHSPQ9NZD4 102 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 ZNF223Q9UK11 482 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 PPIEQ9UNP9 301 aaKnown RBP14.55□□□□□ -0.08
HMGA1-206ENST00000478214 STK38LQ9Y2H1 464 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 NTNG1Q9Y2I2 539 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 PLLPQ9Y342 182 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 TIMM22Q9Y584 194 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 CLCA3PQ9Y6N3 262 aa14.55□□□□□ -0.08
HMGA1-206ENST00000478214 TRAV17A0A0B4J275 112 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 TRBV11-1A0A0K0K1C0 115 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 SYNDIG1LA6NDD5 238 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ULK1O75385 1050 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ESRRBO95718 433 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 TUBBP07437 444 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 NR2F6P10588 404 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 CHN1P15882 459 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 CREB1P16220 341 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 CLCN2P51788 898 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 GPR143P51810 404 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 FOXA1P55317 472 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 IGLV3-21P80748 117 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-206ENST00000478214 FOLH1Q04609 750 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ZNF844Q08AG5 666 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 GALNT1Q10472 559 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-206ENST00000478214 PCLAFQ15004 111 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 KRT71Q3SY84 523 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 CFAP157Q5JU67 520 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 FRMD7Q6ZUT3 714 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 PAGE2Q7Z2X7 111 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ATCAYQ86WG3 371 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 C10orf107Q8IVU9 208 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 THAP3Q8WTV1 239 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-206ENST00000478214 TANKQ92844 425 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 VMP1Q96GC9 406 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 IQCGQ9H095 443 aaKnown RBP14.54□□□□□ -0.08
HMGA1-206ENST00000478214 TEX10Q9NXF1 929 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ANKRD10Q9NXR5 420 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ABI3Q9P2A4 366 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms