RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SPATA13Q96N96 652 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 DMRTA2Q96SC8 542 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 SELENOSQ9BQE4 189 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 NAT10Q9H0A0 1025 aaKnown RBP4.31□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF700Q9H0M5 742 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 NHEJ1Q9H9Q4 299 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF304Q9HCX3 659 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 CHST11Q9NPF2 352 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 MOCS1Q9NZB8 636 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 MARCH4Q9P2E8 410 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-207ENST00000477676 SEC14L3Q9UDX4 400 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 POLG2Q9UHN1 485 aa4.31□□□□□ -1.72
CKS1B-207ENST00000477676 NXT1Q9UKK6 140 aaKnown RBP4.31□□□□□ -1.72
CKS1B-207ENST00000477676 NSG1A0A0A6YYJ2 146 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 TCRBV7S2A1N4TA0A589 114 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 DYTNA2CJ06 578 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 OR5H15A6NDH6 313 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 H0YGG7 62 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RASGRF2O14827 1237 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 AKR1B10O60218 316 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 PRAMEF2O60811 474 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 USP1O94782 785 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ZRANB2O95218 330 aaKnown RBP eCLIP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 SPDEFO95238 335 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RASAL1O95294 804 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 CLDN14O95500 239 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 FTH1P02794 183 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 STATHP02808 62 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 AGAP20933 346 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 SSTR2P30874 369 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 SLC1A1P43005 524 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 EMP2P54851 167 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 EIF3EP60228 445 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ARF3P61204 181 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ACVR1Q04771 509 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 TFF3Q07654 80 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 HSPA14Q0VDF9 509 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ITIH4Q14624 930 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 TERF2Q15554 542 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 INAQ16352 499 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 KCTD19Q17RG1 926 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 DNAJC21Q5F1R6 531 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF766Q5HY98 468 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 TCTE1Q5JU00 501 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ITPRIPL1Q6GPH6 555 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 H3F3CQ6NXT2 135 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 CAVIN1Q6NZI2 390 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 NEK10Q6ZWH5 1172 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 PRSS41Q7RTY9 318 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 PAQR7Q86WK9 346 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 DOLPP1Q86YN1 238 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 DCUN1D3Q8IWE4 304 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RCOR2Q8IZ40 523 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 MMP21Q8N119 569 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RPRMLQ8N4K4 120 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 C9orf106Q8NAJ2 232 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 OR2L3Q8NG85 312 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 OR8K1Q8NGG5 319 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 OR52K1Q8NGK4 314 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 HMGCLL1Q8TB92 370 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 HDAC10Q969S8 669 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ZUFSPQ96AP4 578 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 C14orf79Q96F83 325 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 SCMH1Q96GD3 660 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RAX2Q96IS3 184 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 CCDC138Q96M89 665 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 GPR137Q96N19 417 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 TRIM51Q9BSJ1 452 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ALOXE3Q9BYJ1 711 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 OSBPL8Q9BZF1 889 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 VPS37BQ9H9H4 285 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 GALNT9Q9HCQ5 603 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ABHD10Q9NUJ1 306 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 GALPQ9UBC7 116 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RNF7Q9UBF6 113 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 DKK2Q9UBU2 259 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 ZNF282Q9UDV7 671 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 LCMT1Q9UIC8 334 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 RUVBL1Q9Y265 456 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 AAR2Q9Y312 384 aaKnown RBP4.3□□□□□ -1.72
CKS1B-207ENST00000477676 MEMO1Q9Y316 297 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 EXPH5Q8NEV8 1989 aa4.3□□□□□ -1.72
CKS1B-207ENST00000477676 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 A0A0A6YYC8 382 aaPredicted RBP4.29□□□□□ -1.72
CKS1B-207ENST00000477676 SYCE3A1L190 88 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 ASPDHA6ND91 283 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 NPIPA5E9PKD4 350 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 FAM227AF5H4B4 570 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 I3L1I5 382 aaPredicted RBP4.29□□□□□ -1.72
CKS1B-207ENST00000477676 SRPX2O60687 465 aaPredicted RBP4.29□□□□□ -1.72
CKS1B-207ENST00000477676 DNAJB6O75190 326 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 ULK1O75385 1050 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 NEURL1O76050 574 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 C1orf105O95561 183 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 MBD3O95983 291 aa4.29□□□□□ -1.72
CKS1B-207ENST00000477676 GOT2P00505 430 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms