RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 PCTPQ9UKL6 214 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 PPIEQ9UNP9 301 aaKnown RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 NTNG1Q9Y2I2 539 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 YARS2Q9Y2Z4 477 aaKnown RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 RNF11Q9Y3C5 154 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 HECTD1Q9ULT8 2610 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 DOPEY2Q9Y3R5 2298 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 A8MT66 165 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 A8MVJ9 347 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 C17orf105B2RV13 164 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 H3BQF6 201 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KLRC4-KLRK1H3BQV0 150 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SAP18O00422 153 aaKnown RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 RTCAO00442 366 aaKnown RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 PLPP1O14494 284 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 OR10H2O60403 315 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 GLRA3O75311 464 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SH3BGRLO75368 114 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SUPT7LO94864 414 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KRT6AP02538 564 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KRT6BP04259 564 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SP1P08047 785 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 RPS17P08708 135 aaKnown RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 NR2F6P10588 404 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 GP1BBP13224 206 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KRT15P19012 456 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ATP5F1P24539 256 aaPredicted RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 TNFRSF8P28908 595 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 TPP2P29144 1249 aaPredicted RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 TRHRP34981 398 aaPredicted RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 CD96P40200 585 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 STT3AP46977 705 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 CCT5P48643 541 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KRT6CP48668 564 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 HERVK_113P63132 956 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ALDH6A1Q02252 535 aaKnown RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 RASA2Q15283 850 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 MAPKAPK3Q16644 382 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 C4orf17Q53FE4 359 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KRTCAP3Q53RY4 240 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 UBAP2Q5T6F2 1119 aaKnown RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 ZNF793Q6ZN11 406 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 EID3Q8N140 333 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 CYP4Z2PQ8N1L4 340 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ARMC10Q8N2F6 343 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KIF2BQ8N4N8 673 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 MDS2Q8NDY4 140 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 NFAM1Q8NET5 270 aaPredicted RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 OR8K3Q8NH51 312 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 WDR20Q8TBZ3 569 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SELENOMQ8WWX9 145 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ASB15Q8WXK1 588 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SCMH1Q96GD3 660 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 C1QTNF3Q9BXJ4 246 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ERVK-6Q9BXR3 956 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 OR8D2Q9GZM6 311 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 DDX31Q9H8H2 851 aaKnown RBP9.53□□□□□ -0.88
CCM2-208ENST00000476594 L2HGDHQ9H9P8 463 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 BRF2Q9HAW0 419 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 TIMMDC1Q9NPL8 285 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KLHL1Q9NR64 748 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 HPF1Q9NWY4 346 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ANKRD10Q9NXR5 420 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 KCMF1Q9P0J7 381 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SEC14L3Q9UDX4 400 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 TRPS1Q9UHF7 1281 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ADAM29Q9UKF5 820 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 ERVK-11Q9UQG0 969 aa9.53□□□□□ -0.88
CCM2-208ENST00000476594 SPTBN1Q01082 2364 aaKnown RBP9.52□□□□□ -0.88
CCM2-208ENST00000476594 RELNP78509 3460 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 LRRC14BA6NHZ5 514 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 OR7A17O14581 309 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 LDB3O75112 727 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 ITGA10O75578 1167 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 FAM58BPP0C7Q3 252 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 HSD3B1P14060 373 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 ALOX15P16050 662 aaPredicted RBP9.52□□□□□ -0.89
CCM2-208ENST00000476594 HSD3B2P26439 372 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 HMOX2P30519 316 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 HNRNPFP52597 415 aaKnown RBP9.52□□□□□ -0.89
CCM2-208ENST00000476594 CLCQ05315 142 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 TBL3Q12788 808 aaKnown RBP9.52□□□□□ -0.89
CCM2-208ENST00000476594 TRAF3Q13114 568 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 CCDC153Q494R4 210 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 SPINK14Q6IE38 97 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 OR52E8Q6IFG1 317 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 OPN5Q6U736 354 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 GALNTL5Q7Z4T8 443 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 UBE3DQ7Z6J8 389 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 ST13P4Q8IZP2 240 aaPredicted RBP9.52□□□□□ -0.89
CCM2-208ENST00000476594 TMEM52Q8NDY8 209 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 OR4F6Q8NGB9 312 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 OR52B6Q8NGF0 335 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 SLC22A8Q8TCC7 542 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 ZNF483Q8TF39 744 aaPredicted RBP9.52□□□□□ -0.89
CCM2-208ENST00000476594 THAP3Q8WTV1 239 aaPredicted RBP9.52□□□□□ -0.89
CCM2-208ENST00000476594 MAGED4Q96JG8 741 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 SIGLEC12Q96PQ1 595 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 CDK15Q96Q40 435 aa9.52□□□□□ -0.89
CCM2-208ENST00000476594 IQCGQ9H095 443 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms