RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 DEFA3P59666 94 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 PLAG1Q6DJT9 500 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 FRMPD2BQ6IN97 320 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 BRAT1Q6PJG6 821 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 SPATC1Q76KD6 591 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 RTL10Q7L3V2 364 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 CLIP4Q8N3C7 705 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 CELF2-AS1Q8N7Q2 184 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 SMRP1Q8NCR6 262 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 IL17RDQ8NFM7 739 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 C16orf78Q8WTQ4 265 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 BTN2A2Q8WVV5 523 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 PPCDCQ96CD2 204 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 REPS1Q96D71 796 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 KCNS3Q9BQ31 491 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 ZSCAN5AQ9BUG6 496 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 WRAP53Q9BUR4 548 aaKnown RBP13.75□□□□□ -0.21
NELFCD-204ENST00000474543 TAPBPLQ9BX59 468 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 S1PR5Q9H228 398 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 CLN6Q9NWW5 311 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 TAS2R9Q9NYW1 312 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 ENOPH1Q9UHY7 261 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 RAB23Q9ULC3 237 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 CFL2Q9Y281 166 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 SNX8Q9Y5X2 465 aa13.75□□□□□ -0.21
NELFCD-204ENST00000474543 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 LOC110117498-PIK3R3F6TDL0 507 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 PSMD11O00231 422 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 FOXE1O00358 373 aaPredicted RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ZNF197O14709 1029 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SSX4O60224 188 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 MPZL2O60487 215 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 GPX5O75715 221 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SRPRAP08240 638 aaKnown RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ARAFP10398 606 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 NPPBP16860 134 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 RHCEP18577 417 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 POLR2EP19388 210 aaKnown RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 NR4A2P43354 598 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SLC15A1P46059 708 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 PRLHRP49683 370 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 PNLIPRP1P54315 467 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 IFITM2Q01629 132 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SMAD4Q13485 552 aaKnown RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SLBPQ14493 270 aaKnown RBP eCLIP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TIMM50Q3ZCQ8 353 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ATAT1Q5SQI0 421 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 FAM71E1Q6IPT2 247 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ZNF770Q6IQ21 691 aaPredicted RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 PTCRAQ6ISU1 281 aaPredicted RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TMEM25Q86YD3 366 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SLC44A2Q8IWA5 706 aaPredicted RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 WDR36Q8NI36 951 aaKnown RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 SMG7Q92540 1137 aaKnown RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 PIK3R3Q92569 461 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TRNT1Q96Q11 434 aaKnown RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 OR51B5Q9H339 312 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 NMNAT1Q9HAN9 279 aaPredicted RBP13.74□□□□□ -0.21
NELFCD-204ENST00000474543 DMRT3Q9NQL9 472 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ZNF232Q9UNY5 417 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ARRDC5A6NEK1 342 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 DGKEP52429 567 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TAS2R50P59544 299 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 TBPL1P62380 186 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 DUSP7Q16829 419 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 LAS2Q8IYD9 372 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 LMNTD1Q8N9Z9 388 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 WDR34Q96EX3 536 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 FOPNLQ96NB1 174 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 VPS35Q96QK1 796 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 MYNNQ9NPC7 610 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 ERVK13-1Q9NX77 482 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 DSPPQ9NZW4 1301 aa13.74□□□□□ -0.21
NELFCD-204ENST00000474543 PLXND1Q9Y4D7 1925 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 A0A075B6Q4 140 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 A0A1W2PRU2 124 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 MBTPS2O43462 519 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 LEFTY1O75610 366 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 C1orf105O95561 183 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 APOA1P02647 267 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 TIMP2P16035 220 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 POU1F1P28069 291 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 PBLDP30039 288 aaPredicted RBP13.73□□□□□ -0.21
NELFCD-204ENST00000474543 TMEM115Q12893 351 aaPredicted RBP13.73□□□□□ -0.21
NELFCD-204ENST00000474543 TSTA3Q13630 321 aaPredicted RBP13.73□□□□□ -0.21
NELFCD-204ENST00000474543 STARD3Q14849 445 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 PUS10Q3MIT2 529 aaKnown RBP13.73□□□□□ -0.21
NELFCD-204ENST00000474543 TMEM220Q6QAJ8 160 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 Q8N9G6 341 aaPredicted RBP13.73□□□□□ -0.21
NELFCD-204ENST00000474543 GLYATL1Q969I3 302 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 ZNF486Q96H40 463 aaPredicted RBP13.73□□□□□ -0.21
NELFCD-204ENST00000474543 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 OPALINQ96PE5 141 aa13.73□□□□□ -0.21
NELFCD-204ENST00000474543 SLC30A2Q9BRI3 323 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms