RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 FAM60AQ9NP50 221 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 VNN3Q9NY84 501 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ZNF639Q9UID6 485 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ENTPD2Q9Y5L3 495 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 MYOCOSA0A1B0GUC4 107 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 FAM221BA6H8Z2 402 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 hCG_2039718K7EN88 272 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 PROM1O43490 865 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 NOBOXO60393 691 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 DRD2P14416 443 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 EEF1A2Q05639 463 aaKnown RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 CBLL1Q75N03 491 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 IQCHQ86VS3 1027 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 OOSP2Q86WS3 158 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 UBALD2Q8IYN6 164 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 MARVELD2Q8N4S9 558 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 HORMAD2Q8N7B1 307 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 MAGEE2Q8TD90 523 aaPredicted RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 ZBED6CLQ96FA7 236 aaPredicted RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 TPD52L3Q96J77 140 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 FAIM2Q9BWQ8 316 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SPATA9Q9BWV2 254 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 NLNQ9BYT8 704 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SERHL2Q9H4I8 314 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SOX17Q9H6I2 414 aaPredicted RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 MAGIXQ9H6Y5 334 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 IL21RQ9HBE5 538 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 TAS2R7Q9NYW3 318 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ANKMY1Q9P2S6 941 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 CES1P1Q9UKY3 287 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 DOLKQ9UPQ8 538 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SAMD4AQ9UPU9 718 aaKnown RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 CABIN1Q9Y6J0 2220 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 SEMG1P04279 462 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 NELFEP18615 380 aaKnown RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 FEN1P39748 380 aaKnown RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 GSTM5P46439 218 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 HSPA13P48723 471 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 NCBP2P52298 156 aaKnown RBP eCLIP17.03■□□□□ 0.32
VARS2-206ENST00000473916 VLDLRP98155 873 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 SCARB2Q14108 478 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 SAXO2Q658L1 398 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 ZDHHC21Q8IVQ6 265 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 CHERPQ8IWX8 916 aaKnown RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 EID3Q8N140 333 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 SRFBP1Q8NEF9 429 aaKnown RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 SUN3Q8TAQ9 357 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 ZNF764Q96H86 408 aaPredicted RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 CSF3RQ99062 836 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 POMT2Q9UKY4 750 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 PADI4Q9UM07 663 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 U3KQV3 271 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 NINQ8N4C6 2090 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 ASXL3Q9C0F0 2248 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 H0YJX3 145 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 GNAO1P09471 354 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 TNFRSF1BP20333 461 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 PRIM2P49643 509 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 FADDQ13158 208 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 SPDYE7PQ495Y7 208 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 EIF3MQ7L2H7 374 aaKnown RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 SZRD1Q7Z422 152 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 ZC3H7AQ8IWR0 971 aaKnown RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 RAB8BQ92930 207 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 NEURL3Q96EH8 262 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 OTUB1Q96FW1 271 aaPredicted RBP17.03■□□□□ 0.32
VARS2-206ENST00000473916 MAGED4Q96JG8 741 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 ANKRA2Q9H9E1 313 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 EHD3Q9NZN3 535 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 DLGAP2Q9P1A6 1054 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 DNAJB9Q9UBS3 223 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 KLK4Q9Y5K2 254 aa17.03■□□□□ 0.32
VARS2-206ENST00000473916 DMDP11532 3685 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 MAGEA13PA6NCF6 341 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 AQP9O43315 295 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 UBXN7O94888 489 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 SMIM10L1P0DMW3 83 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 MAGEA2P43356 314 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 TP53BP2Q13625 1128 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 RUNX2Q13950 521 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 CYP27C1Q4G0S4 372 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 CYBRD1Q53TN4 286 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 RPS26P11Q5JNZ5 115 aaPredicted RBP17.02■□□□□ 0.32
VARS2-206ENST00000473916 CEACAM20Q6UY09 585 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 RNF44Q7L0R7 432 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 C6orf120Q7Z4R8 191 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 GKN2Q86XP6 184 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 CCDC116Q8IYX3 515 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 PACRGLQ8N7B6 248 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 TAMM41Q96BW9 452 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 SMIM10Q96HG1 83 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 OSBPL11Q9BXB4 747 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 Q9H521 79 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 YY1AP1Q9H869 796 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 NEUROD4Q9HD90 331 aa17.02■□□□□ 0.32
VARS2-206ENST00000473916 ACSS1Q9NUB1 689 aaPredicted RBP17.02■□□□□ 0.32
VARS2-206ENST00000473916 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms