RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	CGA	P01215	116 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	MT-ND3	P03897	115 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	SFTPB	P07988	381 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	ABHD2	P08910	425 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	P4HA1	P13674	534 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	UGT1A6	P19224	532 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	GPX3	P22352	226 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	PRELP	P51888	382 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	KCNK10	P57789	538 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	FKBP3	Q00688	224 aa	Known RBP	3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	HEPACAM	Q14CZ8	416 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	CDC37	Q16543	378 aa	Predicted RBP	3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	KNOP1	Q1ED39	458 aa	Known RBP	3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	GLIPR1L2	Q4G1C9	344 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	EPC2	Q52LR7	807 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	DOK6	Q6PKX4	331 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	TOM1L2	Q6ZVM7	507 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	PEX5L	Q8IYB4	626 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	GVQW1	Q8N7I0	195 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	OR4L1	Q8NH43	312 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	MGARP	Q8TDB4	240 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	TCP11	Q8WWU5	503 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	C18orf12	Q96KH6	178 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	LRRC61	Q9BV99	259 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	TRPV6	Q9H1D0	765 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	DPEP3	Q9H4B8	488 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	KCNK13	Q9HB14	408 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	NMUR1	Q9HB89	426 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	PIGV	Q9NUD9	493 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	DDX28	Q9NUL7	540 aa	Known RBP	3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	TECR	Q9NZ01	308 aa	Known RBP	3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	CTSZ	Q9UBR2	303 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	IL19	Q9UHD0	177 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	FER1L5	A0AVI2	2057 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	IGLV4-3	A0A075B6K6	122 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	TRBV5-4	A0A0C4DH59	114 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044		A0A1W2PPR1	153 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	BCLAF3	A2AJT9	711 aa	Known RBP	3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	OR5H15	A6NDH6	313 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044		E9PQ18	207 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	CHEK1	O14757	476 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	ZBTB14	O43829	449 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	KIAA0513	O60268	411 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	SORBS2	O94875	1100 aa	Known RBP	3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	OR6A2	O95222	327 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	IGHG1	P01857	330 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	FH	P07954	510 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	PC	P11498	1178 aa	Known RBP	3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	STMN1	P16949	149 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	ZNF18	P17022	549 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	NSF	P46459	744 aa	Known RBP	3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	NT5C2	P49902	561 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	CNN1	P51911	297 aa	Known RBP	3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	SLC12A3	P55017	1021 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	MPPE1	Q53F39	396 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	ETFRF1	Q6IPR1	90 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	NEPRO	Q6NW34	567 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	DLEU7	Q6UYE1	221 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	OR6M1	Q8NGM8	313 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	OR4A16	Q8NH70	328 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	SSC4D	Q8WTU2	575 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	NABP1	Q96AH0	204 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	ZNF560	Q96MR9	790 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	GPR137	Q96N19	417 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	IWS1	Q96ST2	819 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	CABLES2	Q9BTV7	478 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	WWP1	Q9H0M0	922 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	SLC26A1	Q9H2B4	701 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	TUBB1	Q9H4B7	451 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	THAP9	Q9H5L6	903 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	PANK3	Q9H999	370 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	THYN1	Q9P016	225 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	AKAP7	Q9P0M2	348 aa	Predicted RBP	3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044	MUTYH	Q9UIF7	546 aa		3.14	□□□□□ -1.91
PTCD3-209	ENST00000472044		K7EQG2	157 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	TLR4	O00206	839 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	FBP2	O00757	339 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	ARPC1B	O15143	372 aa	Known RBP	3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	B4GAT1	O43505	415 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	NME2P1	O60361	137 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	BCAS2	O75934	225 aa	Predicted RBP	3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	GAS8-AS1	O95177	125 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	SERPINB2	P05120	415 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	LYN	P07948	512 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	AREG	P15514	252 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	YBEY	P58557	167 aa	Predicted RBP	3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	STARD6	P59095	220 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	HERV-K104	P63124	156 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	SRPX	P78539	464 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	CCZ1B	P86790	482 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	CCZ1	P86791	482 aa	Predicted RBP	3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	FASTK	Q14296	549 aa	Known RBP	3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	WSCD2	Q2TBF2	565 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	TATDN1	Q6P1N9	297 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	ZNF730	Q6ZMV8	503 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	WDR49	Q8IV35	697 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	EXOC6	Q8TAG9	804 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	NPRL2	Q8WTW4	380 aa		3.13	□□□□□ -1.91
PTCD3-209	ENST00000472044	PCNP	Q8WW12	178 aa	Known RBP	3.13	□□□□□ -1.91

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