RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CREB3L2Q70SY1 520 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ADGRD2Q7Z7M1 963 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM110Q86TL2 294 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR2AP1Q8NGE2 309 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR13C3Q8NGS6 347 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FANK1Q8TC84 345 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MAP3K3Q99759 626 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MUC13Q9H3R2 512 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 AKTIPQ9H8T0 292 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PCDHB16Q9NRJ7 776 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 EPHA6Q9UF33 1036 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM233B4DJY2 109 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 KLRC4O43908 158 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CNTN5O94779 1100 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZIC2O95409 532 aaPredicted RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 BMP4P12644 408 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SLC10A1Q14973 349 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NPTX1Q15818 432 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.76□□□□□ -0.376e-7■■■■■ 139.2
NPHP3-ACAD11-201ENST00000471702 PRR22Q8IZ63 422 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TLL2Q9Y6L7 1015 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FEZF1A0PJY2 475 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NAA10P41227 235 aaPredicted RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FBXL22Q6P050 247 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TICAM1Q8IUC6 712 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 KCNK13Q9HB14 408 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FAM118AQ9NWS6 357 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ANKRD66B4E2M5 251 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DNM1LO00429 736 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NDUFA6P56556 154 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 VHLLQ6RSH7 139 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SUN5Q8TC36 379 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR51I1Q9H343 314 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF442Q9H7R0 627 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PDE7BQ9NP56 450 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 POFUT2Q9Y2G5 429 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 A8MV72 311 aaPredicted RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ELOCQ15369 112 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZC3H14Q6PJT7 736 aaKnown RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DPY19L3Q6ZPD9 716 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SLC30A8Q8IWU4 369 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CDKN2AIPNLQ96HQ2 116 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CSTAP01040 98 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 S1PR1P21453 382 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PIK3CBP42338 1070 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FAM189A2Q15884 450 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM9Q9P0T7 183 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 WNT7AO00755 349 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HEXAP06865 529 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SFTPDP35247 375 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GRIA1P42261 906 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR4D2P58180 307 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ERVK-8P63133 956 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CDK6Q00534 326 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 C6orf141Q5SZD1 244 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TPGS2Q68CL5 300 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SHISA6Q6ZSJ9 500 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR51A7Q8NH64 312 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 STOML3Q8TAV4 291 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MND1Q9BWT6 205 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LCMT2O60294 686 aaKnown RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CD79AP11912 226 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MALLQ13021 153 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ABRAXAS2Q15018 415 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DIO2Q92813 273 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NPFFR2Q9Y5X5 522 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GAS6Q14393 721 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TPRG1Q6ZUI0 275 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CTU1Q7Z7A3 348 aaKnown RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR4K14Q8NGD5 310 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SLC5A11Q8WWX8 675 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PEX13Q92968 403 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MALSU1Q96EH3 234 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM74Q96NL1 305 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 INPP4AQ96PE3 977 aaPredicted RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TUBA8Q9NY65 449 aaPredicted RBP12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NDUFAF4Q9P032 175 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RAB26Q9ULW5 256 aa12.75□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CD3GP09693 182 aa12.74□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GTF2F2P13984 249 aa12.74□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GNMTQ14749 295 aa12.74□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NSDHLQ15738 373 aa12.74□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DLGAP4Q9Y2H0 992 aa12.74□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF99A8MXY4 864 aaPredicted RBP12.74□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PLSCR1O15162 318 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms