RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MMP12P39900 470 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 STX17P56962 302 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 PTENP60484 403 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SPAG1Q07617 926 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 NCBP1Q09161 790 aaKnown RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ITGA7Q13683 1181 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 RAPSNQ13702 412 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 MAPK6Q16659 721 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ZCWPW2Q504Y3 356 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 PHLDA2Q53GA4 152 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SPDYCQ5MJ68 293 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 TEX38Q6PEX7 206 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SLC25A47Q6Q0C1 308 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 FAM43BQ6ZT52 329 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SERINC5Q86VE9 423 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ZSCAN30Q86W11 494 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ZBTB8OSQ8IWT0 167 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 NELFCDQ8IXH7 590 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 C12orf56Q8IXR9 622 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CDK20Q8IZL9 346 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 EID3Q8N140 333 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CSGALNACT2Q8N6G5 542 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 RNF149Q8NC42 400 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ANKRD20A12PQ8NF67 263 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ZNF519Q8TB69 540 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SMAP2Q8WU79 429 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 SSMEM1Q8WWF3 244 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 LPGAT1Q92604 370 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 ANP32BQ92688 251 aaKnown RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GPATCH1Q9BRR8 931 aaKnown RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 LRRC61Q9BV99 259 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GCOM2Q9BZD3 368 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 FZD8Q9H461 694 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 THAP9Q9H5L6 903 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 RABEP2Q9H5N1 569 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 TRPV4Q9HBA0 871 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CCDC177Q9NQR7 707 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GIMAP4Q9NUV9 329 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 MRGBPQ9NV56 204 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GIMAP2Q9UG22 337 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CHORDC1Q9UHD1 332 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-202ENST00000471307 CENPFP49454 3210 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 GRIN2DO15399 1336 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 DNAH12Q6ZR08 3092 aa4.63□□□□□ -1.67
CCDC39-202ENST00000471307 KIAA0100Q14667 2235 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 TRIM49BA6NDI0 452 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ENO4A6NNW6 628 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 M0QZ92 97 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ZNF195O14628 629 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 EPHB6O15197 1021 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 MAPK13O15264 365 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 PI15O43692 258 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ZSCAN5DPP0CG00 497 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 CYP2A7P20853 494 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 GATA2P23769 480 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 AXLP30530 894 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 RPL21P46778 160 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 GPC3P51654 580 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 CRYBB1P53674 252 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 NLRP11P59045 1033 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 GUCY2DQ02846 1103 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 FASTKD3Q14CZ7 662 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 PCLAFQ15004 111 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 E2F5Q15329 346 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 NTRK2Q16620 822 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 PTGISQ16647 500 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ODF2Q5BJF6 829 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 TCP11X2Q5H9J9 407 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 TCTEX1D4Q5JR98 221 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 LCN1P1Q5VSP4 162 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 PAQR6Q6TCH4 344 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 Q6ZRP5 223 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 RTN4RL2Q86UN3 420 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 SNX32Q86XE0 403 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ZC3H3Q8IXZ2 948 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 C17orf53Q8N3J3 647 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 OR11H4Q8NGC9 324 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 U2AF1L4Q8WU68 220 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 DNAJB3Q8WWF6 145 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 SLAMF9Q96A28 289 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ARSGQ96EG1 525 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 FOXN4Q96NZ1 517 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 MTMR12Q9C0I1 747 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 FAM49AQ9H0Q0 323 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 HSD3B7Q9H2F3 369 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 EQTNQ9NQ60 294 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 AGPAT3Q9NRZ7 376 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 SAMSN1Q9NSI8 373 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 MAN2C1Q9NTJ4 1040 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 PRMT7Q9NVM4 692 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 DMAC2Q9NW81 257 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 STUB1Q9UNE7 303 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 PTRH2Q9Y3E5 179 aaKnown RBP4.62□□□□□ -1.67
CCDC39-202ENST00000471307 STYXL1Q9Y6J8 313 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 ADGRA3Q8IWK6 1321 aa4.62□□□□□ -1.67
CCDC39-202ENST00000471307 FRMPD3Q5JV73 1810 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 A0A1B0GUA9 196 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 FEZF1A0PJY2 475 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 SERINC4A6NH21 518 aa4.61□□□□□ -1.67
CCDC39-202ENST00000471307 ANKRD63C9JTQ0 380 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms