RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	LRRC2	Q9BYS8	371 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621		A0A1W2PRQ8	180 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	TMCO5B	A8MYB1	307 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	PHOX2A	O14813	284 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	CS	O75390	466 aa	Known RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	FRAT2	O75474	233 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	RAD51D	O75771	328 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	NUDT17	P0C025	328 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	GLRA1	P23415	457 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	FASTK	Q14296	549 aa	Known RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	SPHAR	Q15513	63 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	NHLRC3	Q5JS37	347 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF506	Q5JVG8	444 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	CCDC71	Q8IV32	467 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	GGH	Q92820	318 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	PCED1B	Q96HM7	432 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	EPSTI1	Q96J88	318 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	RBM24	Q9BX46	236 aa	Known RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	CXXC4	Q9H2H0	198 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	MARCH7	Q9H992	704 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	PLEK2	Q9NYT0	353 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	CNIH4	Q9P003	139 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF581	Q9P0T4	197 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF107	Q9UII5	783 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB-209	ENST00000470621	FBXO7	Q9Y3I1	522 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621	ACE	P12821	1306 aa		4.18	□□□□□ -1.74
SSB-209	ENST00000470621		A0A0U1RQK1	487 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF320	A2RRD8	509 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	NEDD8-MDP1	E9PL57	170 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	SLC33A1	O00400	549 aa	Predicted RBP	4.17	□□□□□ -1.74
SSB-209	ENST00000470621	TGDS	O95455	350 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	OR9G9	P0C7N8	305 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	GPX3	P22352	226 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	SLC1A6	P48664	564 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	RPL27	P61353	136 aa	Known RBP	4.17	□□□□□ -1.74
SSB-209	ENST00000470621	MFGE8	Q08431	387 aa	Predicted RBP	4.17	□□□□□ -1.74
SSB-209	ENST00000470621	LCP2	Q13094	533 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	DCAF12	Q5T6F0	453 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	TMUB2	Q71RG4	321 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.17	□□□□□ -1.74
SSB-209	ENST00000470621	KRT77	Q7Z794	578 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	MARCH9	Q86YJ5	346 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF781	Q8N8C0	355 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	CLEC1A	Q8NC01	280 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	TRPV3	Q8NET8	790 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	KIAA1524	Q8TCG1	905 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZPLD1	Q8TCW7	415 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	FAM46B	Q96A09	425 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ANKRD27	Q96NW4	1050 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	TRIM7	Q9C029	511 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF446	Q9NWS9	450 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	MIS18A	Q9NYP9	233 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	MGAT4A	Q9UM21	535 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF318	Q5VUA4	2279 aa		4.17	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF646	O15015	1829 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB-209	ENST00000470621	IGLV3-10	A0A075B6K4	115 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621		A0A1W2PQ72	361 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	PSMA7	O14818	248 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	STX6	O43752	255 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	FAM200B	P0CF97	657 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	TNNT3	P45378	269 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB-209	ENST00000470621	ASIC1	P78348	528 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	SLC34A1	Q06495	639 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	SLC17A1	Q14916	467 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	PCK2	Q16822	640 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	KBTBD12	Q3ZCT8	623 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	ALKBH5	Q6P6C2	394 aa	Known RBP	4.16	□□□□□ -1.74
SSB-209	ENST00000470621	RFWD3	Q6PCD5	774 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	LINC00696	Q6ZRV3	163 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB-209	ENST00000470621	LAX1	Q8IWV1	398 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	CLYBL	Q8N0X4	340 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	THEM5	Q8N1Q8	247 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	OR6T1	Q8NGN1	323 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	MRPL24	Q96A35	216 aa	Known RBP	4.16	□□□□□ -1.74
SSB-209	ENST00000470621	SSX3	Q99909	188 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	CLEC5A	Q9NY25	188 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621	CPQ	Q9Y646	472 aa		4.16	□□□□□ -1.74
SSB-209	ENST00000470621		E9PAM4	449 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	ZNF253	O75346	499 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	CSDE1	O75534	798 aa	Known RBP	4.15	□□□□□ -1.75
SSB-209	ENST00000470621	B4GALT1	P15291	398 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	SPR	P35270	261 aa	Predicted RBP	4.15	□□□□□ -1.75
SSB-209	ENST00000470621	MATK	P42679	507 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	ADAR	P55265	1226 aa	Known RBP	4.15	□□□□□ -1.75
SSB-209	ENST00000470621	WSCD2	Q2TBF2	565 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	LCE3E	Q5T5B0	92 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	SNRNP48	Q6IEG0	339 aa	Known RBP	4.15	□□□□□ -1.75
SSB-209	ENST00000470621	HIPK1	Q86Z02	1210 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	LRRC49	Q8IUZ0	686 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	PRCC	Q92733	491 aa	Predicted RBP	4.15	□□□□□ -1.75
SSB-209	ENST00000470621	ULK4	Q96C45	1275 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	RAB40C	Q96S21	281 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	HSD17B14	Q9BPX1	270 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	NUSAP1	Q9BXS6	441 aa	Known RBP	4.15	□□□□□ -1.75
SSB-209	ENST00000470621	NT5DC2	Q9H857	520 aa		4.15	□□□□□ -1.75
SSB-209	ENST00000470621	SP140L	Q9H930	580 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms