RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 PGRMC2O15173 223 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CASC3O15234 703 aaKnown RBP14.29□□□□□ -0.12
COL4A5-203ENST00000470339 HSD17B1P14061 328 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 RAB38P57729 211 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 PLIN5Q00G26 463 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CEACAM7Q14002 265 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CEBPEQ15744 281 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 C6orf163Q5TEZ5 329 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 C18orf63Q68DL7 685 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 OR52E8Q6IFG1 317 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 MED25Q71SY5 747 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 PRSS41Q7RTY9 318 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 MSRB3Q8IXL7 192 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CLECL1Q8IZS7 167 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 TRIML2Q8N7C3 387 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 OR9A4Q8NGU2 314 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 ZFP28Q8NHY6 868 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 PSMA8Q8TAA3 256 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 TANKQ92844 425 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CIDECQ96AQ7 238 aaPredicted RBP14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CLPTM1LQ96KA5 538 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 NDC1Q9BTX1 674 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 RPF2Q9H7B2 306 aaKnown RBP14.29□□□□□ -0.12
COL4A5-203ENST00000470339 SYNDIG1Q9H7V2 258 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 PARD6AQ9NPB6 346 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 RXFP3Q9NSD7 469 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CUTCQ9NTM9 273 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 GIMAP4Q9NUV9 329 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 CMTM6Q9NX76 183 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 TAS2R9Q9NYW1 312 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 SLC25A37Q9NYZ2 338 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 ZNF282Q9UDV7 671 aaPredicted RBP14.29□□□□□ -0.12
COL4A5-203ENST00000470339 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.29□□□□□ -0.12
COL4A5-203ENST00000470339 VPS4AQ9UN37 437 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 NEUROG3Q9Y4Z2 214 aa14.29□□□□□ -0.12
COL4A5-203ENST00000470339 A0A0A6YYC8 382 aaPredicted RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 C4orf47A7E2U8 309 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 EVPLLA8MZ36 301 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 MYO1GB0I1T2 1018 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 TMX2-CTNND1H3BSU7 103 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 I3L1I5 382 aaPredicted RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 SGK494L7N484 410 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 NME4O00746 187 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 SEC16AO15027 2179 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 CHST10O43529 356 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 MED26O95402 600 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 CPSF4O95639 269 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 RNH1P13489 461 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 CDKN2CP42773 168 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 MANFP55145 182 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 HBA1P69905 142 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 ELF3P78545 371 aaPredicted RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 TRAP1Q12931 704 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 IL11RAQ14626 422 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 AASDHQ4L235 1098 aaPredicted RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 ZNF621Q6ZSS3 439 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 OR4A15Q8NGL6 344 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 EXOSC8Q96B26 276 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 CPPED1Q9BRF8 314 aaPredicted RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 NEUROD4Q9HD90 331 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 SIDT1Q9NXL6 827 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 SUCOQ9UBS9 1254 aaKnown RBP14.28□□□□□ -0.12
COL4A5-203ENST00000470339 BCAP29Q9UHQ4 241 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 SRPK3Q9UPE1 567 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 CORO2BQ9UQ03 480 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 ERVK-11Q9UQG0 969 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 PCDHGA1Q9Y5H4 931 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 ZNF780BQ9Y6R6 833 aa14.28□□□□□ -0.12
COL4A5-203ENST00000470339 PCNX2A6NKB5 2137 aa14.27□□□□□ -0.12
COL4A5-203ENST00000470339 PRORSD1PA6NEY8 169 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF860A6NHJ4 632 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 PROB1E7EW31 1015 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 DSCR3O14972 297 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF749O43361 778 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 DNAJB6O75190 326 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 RDH16O75452 317 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 PDE5AO76074 875 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 C6orf47O95873 294 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 CDK4P11802 303 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 CSNK2A2P19784 350 aaPredicted RBP14.27□□□□□ -0.13
COL4A5-203ENST00000470339 IL10P22301 178 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 PPP2R1BP30154 601 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 NTSP30990 170 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 CCKBRP32239 447 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 CSTF2P33240 577 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL4A5-203ENST00000470339 MPIP34949 423 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 PLA2G5P39877 138 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 TRIM25Q14258 630 aaKnown RBP14.27□□□□□ -0.13
COL4A5-203ENST00000470339 RABL3Q5HYI8 236 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 PHF19Q5T6S3 580 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 RBM44Q6ZP01 1051 aaKnown RBP14.27□□□□□ -0.13
COL4A5-203ENST00000470339 PIP4P1Q86T03 277 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 HPS6Q86YV9 775 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 C7orf57Q8NEG2 295 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 ZNF681Q96N22 645 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 AMDHD1Q96NU7 426 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 BBS4Q96RK4 519 aa14.27□□□□□ -0.13
COL4A5-203ENST00000470339 DPH2Q9BQC3 489 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms