RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 AKAP9Q99996 3911 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 PHF3Q92576 2039 aaKnown RBP16.22■□□□□ 0.19
COL7A1-208ENST00000470076 EML6Q6ZMW3 1958 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 INTS1Q8N201 2190 aaKnown RBP16.21■□□□□ 0.19
COL7A1-208ENST00000470076 MYOCOSA0A1B0GUC4 107 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 FANCGO15287 622 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 RAD51CO43502 376 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 PDE9AO76083 593 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 POU3F2P20265 443 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-208ENST00000470076 CAPN3P20807 821 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 GPX6P59796 221 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 PCDH1Q08174 1060 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 KBTBD12Q3ZCT8 623 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 NDUFAF5Q5TEU4 345 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 OPN5Q6U736 354 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 MEX3BQ6ZN04 569 aaKnown RBP16.21■□□□□ 0.19
COL7A1-208ENST00000470076 CEP128Q6ZU80 1094 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 RAPH1Q70E73 1250 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 TBC1D1Q86TI0 1168 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-208ENST00000470076 ISCA2Q86U28 154 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 SLC22A16Q86VW1 577 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 MARVELD2Q8N4S9 558 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 GOLM1Q8NBJ4 401 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 OR7G3Q8NG95 312 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 CMTM7Q96FZ5 175 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 SGCZQ96LD1 299 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 TREX2Q9BQ50 279 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-208ENST00000470076 FAM173AQ9BQD7 235 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 OPTCQ9UBM4 332 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 ADGRE2Q9UHX3 823 aa16.21■□□□□ 0.19
COL7A1-208ENST00000470076 PINLYPA6NC86 204 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 SUPT3HB4E1H0 165 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 K7EPI3 171 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 RTCAO00442 366 aaKnown RBP16.2■□□□□ 0.18
COL7A1-208ENST00000470076 KERAO60938 352 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 SUPT3HO75486 399 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 TGFB1P01137 390 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 SLC35E2BP0CK96 405 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 PCNAP12004 261 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 COX7A2P14406 83 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 CNR1P21554 472 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 CPN2P22792 545 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 CRABP2P29373 138 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 CHRNB4P30926 498 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 SSR2P43308 183 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 CAV1Q03135 178 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 BIKQ13323 160 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 SLMAPQ14BN4 828 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 EMC4Q5J8M3 183 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 KHDRBS2Q5VWX1 349 aaKnown RBP16.2■□□□□ 0.18
COL7A1-208ENST00000470076 CMC1Q7Z7K0 106 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 PPM1NQ8N819 430 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 ZNF321PQ8N8H1 164 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 UBTD2Q8WUN7 234 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 RND1Q92730 232 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 ANKRD9Q96BM1 317 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-208ENST00000470076 SCYL1Q96KG9 808 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 ATOH8Q96SQ7 321 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 TTTY12Q9BZ98 90 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 MS4A12Q9NXJ0 267 aa16.2■□□□□ 0.18
COL7A1-208ENST00000470076 UTP11Q9Y3A2 253 aaKnown RBP16.2■□□□□ 0.18
COL7A1-208ENST00000470076 HCFC1P51610 2035 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 HIVEP1P15822 2718 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 OR14I1A6ND48 311 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 FAM166BA8MTA8 275 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 GLSO94925 669 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-208ENST00000470076 LTA4HP09960 611 aaKnown RBP16.19■□□□□ 0.18
COL7A1-208ENST00000470076 EPB42P16452 691 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 STX2P32856 288 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 PLTPP55058 493 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 IGLV3-21P80748 117 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-208ENST00000470076 ID2Q02363 134 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 TLE4Q04727 773 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 DLG1Q12959 904 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 NAB1Q13506 487 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 MPEG1Q2M385 716 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 ZNF750Q32MQ0 723 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 DEPDC1Q5TB30 811 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 OR4C11Q6IEV9 310 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 GRHL2Q6ISB3 625 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 ACAD11Q709F0 780 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 LILRB4Q8NHJ6 448 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 ZNF721Q8TF20 911 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 SREK1Q8WXA9 508 aaKnown RBP16.19■□□□□ 0.18
COL7A1-208ENST00000470076 ANP32BQ92688 251 aaKnown RBP16.19■□□□□ 0.18
COL7A1-208ENST00000470076 CENPKQ9BS16 269 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 IL1RL2Q9HB29 575 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 MCCC2Q9HCC0 563 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 SACM1LQ9NTJ5 587 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 RNF6Q9Y252 685 aa16.19■□□□□ 0.18
COL7A1-208ENST00000470076 A0A0G2JMM0 328 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 A0A1W2PPB8 328 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 A0A1W2PRS3 328 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 SYCE1LA8MT33 242 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 KIR3DP1A8MWS1 328 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 NPIPA2E9PIF3 369 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 NPIPA3F8WFD2 350 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 UBXN8O00124 270 aa16.18■□□□□ 0.18
COL7A1-208ENST00000470076 BCKDKO14874 412 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms