RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 IYDQ6PHW0 289 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 RINLQ6ZS11 566 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 RFLNAQ6ZTI6 216 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 TAOK1Q7L7X3 1001 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 KCNMB4Q86W47 210 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 CCDC25Q86WR0 208 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 KLHDC8BQ8IXV7 354 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SFRP1Q8N474 314 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 RASGEF1AQ8N9B8 481 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SPATA4Q8NEY3 305 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 PYROXD1Q8WU10 500 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 LCN9Q8WX39 176 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 NCSTNQ92542 709 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 TRIM63Q969Q1 353 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SLC22A18Q96BI1 424 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 CFAP36Q96G28 342 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 VPS39Q96JC1 886 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SMIM14Q96QK8 99 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 KIFC1Q9BW19 673 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SRMSQ9H3Y6 488 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 MVB12BQ9H7P6 319 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 UCK1Q9HA47 277 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SPATS2LQ9NUQ6 558 aaKnown RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 IRAK4Q9NWZ3 460 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 TBC1D29Q9UFV1 150 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 LNPEPQ9UIQ6 1025 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 KCND3Q9UK17 655 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 PSMD13Q9UNM6 376 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 ASF1AQ9Y294 204 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 B3GNT3Q9Y2A9 372 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 COX11Q9Y6N1 276 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 RNF215Q9Y6U7 377 aa6□□□□□ -1.45
PTCD3-208ENST00000469585 ASCC3Q8N3C0 2202 aaKnown RBP6□□□□□ -1.45
PTCD3-208ENST00000469585 GSAPA4D1B5 854 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 D6RAR5 112 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CCL22O00626 93 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SPAG6O75602 509 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TK1P04183 234 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 PROS1P07225 676 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 HIST1H2AGP0C0S8 130 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 HIST1H2ADP20671 130 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 STX2P32856 288 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SHMT2P34897 504 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 GRK5P34947 590 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SKIV2L2P42285 1042 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF84P51523 738 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TUBA4AP68366 448 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CRADDP78560 199 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CCL7P80098 99 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 C2orf54Q08AI8 447 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 HSPA14Q0VDF9 509 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 PDIA2Q13087 525 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 NFE2L1Q14494 772 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 PTPRCAPQ14761 206 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ANKRD20A4Q4UJ75 823 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TPRG1LQ5T0D9 272 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 RNASEH2BQ5TBB1 312 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 IRGCQ6NXR0 463 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 WDR74Q6RFH5 385 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ABRAXAS1Q6UWZ7 409 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF788Q6ZQV5 615 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TMEM26Q6ZUK4 368 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 PRUNE1Q86TP1 453 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ADGRG3Q86Y34 549 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ZBED8Q8IZ13 594 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 NAGSQ8N159 534 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 FBXO39Q8N4B4 442 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 PNLDC1Q8NA58 520 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ACVR1CQ8NER5 493 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SEMA6DQ8NFY4 1073 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 OR4D9Q8NGE8 314 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CCL4L1Q8NHW4 92 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SLC2A12Q8TD20 617 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SLC37A2Q8TED4 501 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TFGQ92734 400 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 VOPP1Q96AW1 172 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF845Q96IR2 970 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 LINC00615Q96LM1 132 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TSNARE1Q96NA8 513 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TEFMQ96QE5 360 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CD180Q99467 661 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 EBNA1BP2Q99848 306 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ERP44Q9BS26 406 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 ZPBPQ9BS86 351 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 H2AFJQ9BTM1 129 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 GATA5Q9BWX5 397 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 WWP1Q9H0M0 922 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 DPH5Q9H2P9 285 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 COG4Q9H9E3 785 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 POLR1BQ9H9Y6 1135 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SEPSECSQ9HD40 501 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 PDE7BQ9NP56 450 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SOHLH2Q9NX45 425 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TAS2R13Q9NYV9 303 aa5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TRMT6Q9UJA5 497 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CORO1CQ9ULV4 474 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 TDRKHQ9Y2W6 561 aaKnown RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 SIRT4Q9Y6E7 314 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-208ENST00000469585 CABIN1Q9Y6J0 2220 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms