RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 TMEM52Q8NDY8 209 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 OR52N2Q8NGI0 321 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 STAG3L4Q8TBR4 150 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 PTPMT1Q8WUK0 201 aaPredicted RBP11.89□□□□□ -0.51
SRM-203ENST00000465788 CMTM7Q96FZ5 175 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 RBBP8Q99708 897 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 PELOQ9BRX2 385 aaKnown RBP11.89□□□□□ -0.51
SRM-203ENST00000465788 MS4A8Q9BY19 250 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 TTTY12Q9BZ98 90 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 OR8D2Q9GZM6 311 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 IL1RL2Q9HB29 575 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 PRDM7Q9NQW5 492 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 NUDT4Q9NZJ9 180 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 WHRNQ9P202 907 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 ZNF490Q9ULM2 529 aaPredicted RBP11.89□□□□□ -0.51
SRM-203ENST00000465788 RNF6Q9Y252 685 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 MTO1Q9Y2Z2 717 aaKnown RBP11.89□□□□□ -0.51
SRM-203ENST00000465788 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 TACC2O95359 2948 aa11.89□□□□□ -0.51
SRM-203ENST00000465788 EML6Q6ZMW3 1958 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 TMEM200CA6NKL6 621 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 WWP2O00308 870 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 TP73O15350 636 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 SUSD5O60279 629 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 CCNT2O60583 730 aaKnown RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 WDR1O75083 606 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 OR6B1O95007 311 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 TBX6O95947 436 aaPredicted RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 IGFBP2P18065 325 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 HIST1H1TP22492 207 aaPredicted RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 ATP5A1P25705 553 aaKnown RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 ACVR2AP27037 513 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 TLX1P31314 330 aaPredicted RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 SOX3P41225 446 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 MSH2P43246 934 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 RPL21P46778 160 aaKnown RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 RNF4P78317 190 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 PHEXP78562 749 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 PCDH1Q08174 1060 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 ZKSCAN8Q15776 578 aaPredicted RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 HYAL4Q2M3T9 481 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 GRTP1Q5TC63 336 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 MED27Q6P2C8 311 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 SPNS3Q6ZMD2 512 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 FAM47EQ6ZV65 393 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 VN1R5Q7Z5H4 357 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 MMGT1Q8N4V1 131 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 ACOT4Q8N9L9 421 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 OR5M3Q8NGP4 307 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 NUBPLQ8TB37 319 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 SLC22A8Q8TCC7 542 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 SLC2A12Q8TD20 617 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 ZNF473Q8WTR7 871 aaKnown RBP11.88□□□□□ -0.51
SRM-203ENST00000465788 SARAFQ96BY9 339 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 UBXN10Q96LJ8 280 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 F2RL3Q96RI0 385 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 SMC6Q96SB8 1091 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 CSF3RQ99062 836 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 CD244Q9BZW8 370 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 DEFB127Q9H1M4 99 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 NMRAL1Q9HBL8 299 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 DEPPQ9NTK1 212 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 KCNN3Q9UGI6 736 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 PHF11Q9UIL8 331 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 ITGB1BP2Q9UKP3 347 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 SNX24Q9Y343 169 aa11.88□□□□□ -0.51
SRM-203ENST00000465788 A0A1B0GVC2 190 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 FAM159BA6NKW6 160 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 NPIPA2E9PIF3 369 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 NPIPA3F8WFD2 350 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 AQP7O14520 342 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 PHGDHO43175 533 aaKnown RBP11.87□□□□□ -0.51
SRM-203ENST00000465788 HCN1O60741 890 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 PDE9AO76083 593 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 GLSO94925 669 aaPredicted RBP11.87□□□□□ -0.51
SRM-203ENST00000465788 GABRA1P14867 456 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 CPN2P22792 545 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 MSX1P28360 303 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 CRABP2P29373 138 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 PEX19P40855 299 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 SSR2P43308 183 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 STT3AP46977 705 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 IGLV3-21P80748 117 aaPredicted RBP11.87□□□□□ -0.51
SRM-203ENST00000465788 PLIN5Q00G26 463 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 CAV1Q03135 178 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 NAB1Q13506 487 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 OR4D1Q15615 310 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 GXYLT1Q4G148 440 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
SRM-203ENST00000465788 CES4AQ5XG92 561 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 C8orf74Q6P047 294 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
SRM-203ENST00000465788 DMRTC2Q8IXT2 367 aaPredicted RBP11.87□□□□□ -0.51
SRM-203ENST00000465788 LAS2Q8IYD9 372 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 MARVELD2Q8N4S9 558 aa11.87□□□□□ -0.51
SRM-203ENST00000465788 UBTD2Q8WUN7 234 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms