RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 P04436 131 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 IFNA16P05015 189 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 PGAM1P18669 254 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 BMP5P22003 454 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 HOXC12P31275 282 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 CXCR5P32302 372 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 PIGAP37287 484 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 LIM2P55344 173 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 WNT3P56703 355 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 HSPB2Q16082 182 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 ADNP2Q6IQ32 1131 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 OPN5Q6U736 354 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 SLCO4C1Q6ZQN7 724 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 VN1R5Q7Z5H4 357 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 GALNT7Q86SF2 657 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 LRRC25Q8N386 305 aaPredicted RBP10.85□□□□□ -0.67
CNOT4-208ENST00000465721 FBXW8Q8N3Y1 598 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 OR2L5Q8NG80 312 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 SLC2A12Q8TD20 617 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 ARSGQ96EG1 525 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 C18orf12Q96KH6 178 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 SLC6A15Q9H2J7 730 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 PLAC1Q9HBJ0 212 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 ALKBH4Q9NXW9 302 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 VTI1BQ9UEU0 232 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 DAPP1Q9UN19 280 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 PCDHGB3Q9Y5G1 929 aa10.85□□□□□ -0.67
CNOT4-208ENST00000465721 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.85□□□□□ -0.67
CNOT4-208ENST00000465721 A0A088AWK7 358 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 NPEPPSL1A6NEC2 478 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 CTNSO60931 367 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 BANF1O75531 89 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 INHBBP09529 407 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ZNF37AP17032 561 aaPredicted RBP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ZNF10P21506 573 aaPredicted RBP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 GSTM2P28161 218 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 CEACAM8P31997 349 aaPredicted RBP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 SLC6A12P48065 614 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 PLA2G16P53816 162 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 SLBPQ14493 270 aaKnown RBP eCLIP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 MPEG1Q2M385 716 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ZNF791Q3KP31 576 aaPredicted RBP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ACSF3Q4G176 576 aaPredicted RBP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 TMEM198Q66K66 360 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ABHD17CQ6PCB6 329 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 LYPD8Q6UX82 237 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 TMIGD1Q6UXZ0 262 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 GPATCH11Q8N954 259 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 TNIP2Q8NFZ5 429 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 TTLQ8NG68 377 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 NEIL3Q8TAT5 605 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 PAQR8Q8TEZ7 354 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ZNF721Q8TF20 911 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 PDLIM5Q96HC4 596 aaKnown RBP10.84□□□□□ -0.67
CNOT4-208ENST00000465721 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 SERINC2Q96SA4 455 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ALOXE3Q9BYJ1 711 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 EXO5Q9H790 373 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 PLEKHF2Q9H8W4 249 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 PROK2Q9HC23 129 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 ACKR4Q9NPB9 350 aa10.84□□□□□ -0.67
CNOT4-208ENST00000465721 C17orf105B2RV13 164 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 CDC7O00311 574 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 DVL2O14641 736 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 LDB3O75112 727 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 CLEC3AO75596 197 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 ETHE1O95571 254 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 HEXAP06865 529 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 C1GALT1C1LP0DN25 315 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 GNAZP19086 355 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 ZNF136P52737 540 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 MTTPP55157 894 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 CDKL1Q00532 357 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 ASPHQ12797 758 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 KEAP1Q14145 624 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 EFTUD2Q15029 972 aaKnown RBP eCLIP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 C18orf21Q32NC0 220 aaPredicted RBP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 PIGGQ5H8A4 983 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 RNASEH2BQ5TBB1 312 aaKnown RBP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 PRAMEF20Q5VT98 475 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 FAM45BPQ6NSW5 357 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 TRIM40Q6P9F5 258 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 PRIMA1Q86XR5 153 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 C9orf40Q8IXQ3 194 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 OR5L2Q8NGL0 311 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 GABPB2Q8TAK5 448 aaPredicted RBP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 FAM45AQ8TCE6 357 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 CCT6BQ92526 530 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 SPACA9Q96E40 222 aaPredicted RBP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 CERS2Q96G23 380 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 CAPZA3Q96KX2 299 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 REXO4Q9GZR2 422 aaKnown RBP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 RBSNQ9H1K0 784 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 NT5DC2Q9H857 520 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 ZFP64Q9NPA5 681 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 QPCTLQ9NXS2 382 aa10.83□□□□□ -0.68
CNOT4-208ENST00000465721 MTRF1LQ9UGC7 380 aaKnown RBP10.83□□□□□ -0.68
CNOT4-208ENST00000465721 FOXD3Q9UJU5 478 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms