RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MLC1Q15049 377 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 PLCL1Q15111 1095 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SMAD2Q15796 467 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SHQ1Q6PI26 577 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SLC30A8Q8IWU4 369 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 TRIM48Q8IWZ4 208 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SLC22A18ASQ8N1D0 253 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 NEURL3Q96EH8 262 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 TPD52L3Q96J77 140 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 GSDMCQ9BYG8 508 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SMURF2Q9HAU4 748 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 CDC14AQ9UNH5 594 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 KLHL20Q9Y2M5 609 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SNX8Q9Y5X2 465 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 GCM2O75603 506 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 STATHP02808 62 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 ARAFP10398 606 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 RXRGP48443 463 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 CRYBA2P53672 197 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 STXBP1P61764 594 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 CCDC85BQ15834 202 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 ZIK1Q3SY52 487 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 SAXO2Q658L1 398 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 HS3ST5Q8IZT8 346 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 NFKBIDQ8NI38 313 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 DOHHQ9BU89 302 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 GPR174Q9BXC1 333 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 LIN28AQ9H9Z2 209 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 LMAN1LQ9HAT1 526 aa20.63■□□□□ 0.89
PDLIM2-216ENST00000464275 A0A0J9YVX5 310 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 hCG_2039718K7EN88 272 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 SEC14L2O76054 403 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 HIST1H1TP22492 207 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 ATP5A1P25705 553 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 CD6P30203 668 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 DSTNP60981 165 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 SELENOWP63302 87 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 VLDLRP98155 873 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 CDK6Q00534 326 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 EEF1A2Q05639 463 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 SLAMF1Q13291 335 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 TJAP1Q5JTD0 557 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 NDUFAF5Q5TEU4 345 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 MRM1Q6IN84 353 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 FAM180BQ6P0A1 224 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 TMEM26Q6ZUK4 368 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 ZNF687Q8N1G0 1237 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 FLVCR1-AS1Q8TAF5 88 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 THAP11Q96EK4 314 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 MACROD1Q9BQ69 325 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 GABARAPL1Q9H0R8 117 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 TOR3AQ9H497 397 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 FAM118AQ9NWS6 357 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 C5AR2Q9P296 337 aa20.62■□□□□ 0.89
PDLIM2-216ENST00000464275 C4orf51C9J302 202 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 VIPP01282 170 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 CRHBPP24387 322 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 AQP1P29972 269 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ARHGDIAP52565 204 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 RAD23AP54725 363 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 KCNJ10P78508 379 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 TGM3Q08188 693 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 PPP1R8Q12972 351 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 EIF2B5Q13144 721 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 GPR107Q5VW38 600 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ACOT4Q8N9L9 421 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 TSTD1Q8NFU3 115 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 OR8K5Q8NH50 307 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 RAB2BQ8WUD1 216 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 SOX17Q9H6I2 414 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 GPR27Q9NS67 375 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 VNN3Q9NY84 501 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 APOBEC3BQ9UH17 382 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ANGPT4Q9Y264 503 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ASB4Q9Y574 426 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 SCN3AQ9NY46 2000 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 DPM1O60762 260 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 THEGLP0DJG4 465 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 EEF1B2P24534 225 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 DNAJA1P31689 397 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ITGA1P56199 1179 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ZC3H7AQ8IWR0 971 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ARL10Q8N8L6 244 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 PSMA8Q8TAA3 256 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 OR2A14Q96R47 310 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 TMEM121BQ9BXQ6 578 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 SIRT3Q9NTG7 399 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 POT1Q9NUX5 634 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 CA14Q9ULX7 337 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 DUSP12Q9UNI6 340 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 ORC6Q9Y5N6 252 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 U3KQV3 271 aa20.61■□□□□ 0.89
PDLIM2-216ENST00000464275 CEP192Q8TEP8 1941 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 SPTY2D1-AS1A0A0U1RR47 76 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 SH3PXD2BA1X283 911 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 OR5K4A6NMS3 321 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 TNFSF14O43557 240 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 IFNA14P01570 189 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 FPR1P21462 350 aa20.6■□□□□ 0.89
PDLIM2-216ENST00000464275 TPD52P55327 224 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms