RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MPDZO75970 2070 aa7.4□□□□□ -1.23
CDC42BPA-210ENST00000462553 ABCA2Q9BZC7 2435 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 IGKV3D-11A0A0A0MRZ8 115 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A0G2JN53 185 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 LRIT2A6NDA9 550 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 A8MT66 165 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 MAGEB17A8MXT2 336 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 FOXO6A8MYZ6 492 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 E9PLN8 166 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR7A17O14581 309 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CLEC3AO75596 197 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 SLC25A12O75746 678 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 SLU7O95391 586 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 FHP07954 510 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 RPS17P08708 135 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 COL6A2P12110 1019 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GFAPP14136 432 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CD46P15529 392 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ABOP16442 354 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF24P17028 368 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CAPN3P20807 821 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GSTM2P28161 218 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 HNF4AP41235 474 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 NR0B1P51843 470 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 IRF8Q02556 426 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 TFF3Q07654 80 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GTF2H2Q13888 395 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 NSDHLQ15738 373 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 XKR6Q5GH73 641 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GRHL2Q6ISB3 625 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 SLC25A25Q6KCM7 469 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GTF2H2CQ6P1K8 395 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 KLC3Q6P597 504 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 MEX3BQ6ZN04 569 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF793Q6ZN11 406 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 RPS27LQ71UM5 84 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ABHD13Q7L211 337 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GOLGA7Q7Z5G4 137 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 UBE3DQ7Z6J8 389 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 TDRPQ86YL5 185 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 LAS2Q8IYD9 372 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CYP4X1Q8N118 509 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 KRT78Q8N1N4 520 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CA13Q8N1Q1 262 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ARMC10Q8N2F6 343 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 GHDCQ8N2G8 530 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 RNF175Q8N4F7 328 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 TBC1D19Q8N5T2 526 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 SLC5A8Q8N695 610 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 TEX9Q8N6V9 391 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 TTLQ8NG68 377 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 AENQ8WTP8 325 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZNF473Q8WTR7 871 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 MTBPQ96DY7 904 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 PHF21BQ96EK2 531 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 SEC16BQ96JE7 1060 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 NSUN5Q96P11 429 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 LPAR4Q99677 370 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 VKORC1Q9BQB6 163 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 EFCAB11Q9BUY7 163 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CAPS2Q9BXY5 557 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 MS4A8Q9BY19 250 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 MRPL46Q9H2W6 279 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 CDCP1Q9H5V8 836 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 ZBTB26Q9HCK0 441 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 LRFN1Q9P244 771 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 PCTPQ9UKL6 214 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 EMCNQ9ULC0 261 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 V9GYY5 206 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 NINQ8N4C6 2090 aa7.39□□□□□ -1.23
CDC42BPA-210ENST00000462553 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 A0A1W2PPM1 405 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 SAGE2PA6NJ88 616 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 STX16-NPEPL1H3BU86 382 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TGFBR3LH3BV60 316 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 GOLGA8RI6L899 631 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 STX16O14662 325 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 ERI3O43414 337 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CHST10O43529 356 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 H2AFYO75367 372 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 MLYCDO95822 493 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 RBP1P09455 135 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CERS1P27544 350 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRHRP34981 398 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 HSD17B3P37058 310 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 RFC3P40938 356 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 HNRNPFP52597 415 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 OR4D2P58180 307 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 MLF1P58340 268 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 STXBP1P61764 594 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 OC90Q02509 493 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 TRAF3Q13114 568 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 LAPTM5Q13571 262 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 RUNX2Q13950 521 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 KRTAP21-3Q3LHN1 58 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 CMPK2Q5EBM0 449 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 PAGE2BQ5JRK9 111 aa7.38□□□□□ -1.23
CDC42BPA-210ENST00000462553 METTL2BQ6P1Q9 378 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms