RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 C10orf62Q5T681 223 aaPredicted RBP14.37□□□□□ -0.11
VARS-219ENST00000461328 LETMD1Q6P1Q0 360 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 GPR180Q86V85 440 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 TDRPQ86YL5 185 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 LGI4Q8N135 537 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 ZCCHC7Q8N3Z6 543 aaKnown RBP14.37□□□□□ -0.11
VARS-219ENST00000461328 TMEM151AQ8N4L1 468 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 B3GNT7Q8NFL0 401 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 ELP5Q8TE02 316 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 NR4A3Q92570 626 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 NPAS2Q99743 824 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 C1QTNF3Q9BXJ4 246 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 DEFB126Q9BYW3 111 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
VARS-219ENST00000461328 KCMF1Q9P0J7 381 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 SNX6Q9UNH7 406 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 OSGIN2Q9Y236 505 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 CLCA3PQ9Y6N3 262 aa14.37□□□□□ -0.11
VARS-219ENST00000461328 ARHGAP10A1A4S6 786 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 PPP6CO00743 305 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 COPEO14579 308 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 MAN1A2O60476 641 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 EEDO75530 441 aaKnown RBP14.36□□□□□ -0.11
VARS-219ENST00000461328 OR4F21O95013 312 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 SEMA3DO95025 777 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 NR2F6P10588 404 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 CD96P40200 585 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 CCT5P48643 541 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 ARFIP1P53367 373 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 TNFRSF17Q02223 184 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 RASA2Q15283 850 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 OR1C1Q15619 314 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 ELAVL1Q15717 326 aaKnown RBP14.36□□□□□ -0.11
VARS-219ENST00000461328 UNC50Q53HI1 259 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 ZNF324BQ6AW86 544 aaPredicted RBP14.36□□□□□ -0.11
VARS-219ENST00000461328 EMBQ6PCB8 327 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 GPRIN3Q6ZVF9 776 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 RPS19BP1Q86WX3 136 aaKnown RBP14.36□□□□□ -0.11
VARS-219ENST00000461328 TMEM132CQ8N3T6 1108 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 HORMAD2Q8N7B1 307 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 CCNYL1Q8N7R7 359 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 CDYL2Q8N8U2 506 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 OR2W6PQ8NHA6 318 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 THAP3Q8WTV1 239 aaPredicted RBP14.36□□□□□ -0.11
VARS-219ENST00000461328 SELENOMQ8WWX9 145 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 NCLNQ969V3 563 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 CCDC126Q96EE4 140 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 VMP1Q96GC9 406 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 SIGLEC12Q96PQ1 595 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 ALOXE3Q9BYJ1 711 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 WDR41Q9HAD4 459 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 KLHL1Q9NR64 748 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 AHSPQ9NZD4 102 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
VARS-219ENST00000461328 TRPS1Q9UHF7 1281 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 SLC12A4Q9UP95 1085 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 STK38LQ9Y2H1 464 aa14.36□□□□□ -0.11
VARS-219ENST00000461328 USP9YO00507 2555 aaPredicted RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 A1L4Q6 167 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 FCHO1O14526 889 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 TMPRSS11DO60235 418 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 PRKRAO75569 313 aaKnown RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 MLYCDO95822 493 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 LDLRP01130 860 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 GBAP04062 536 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 FAM58BPP0C7Q3 252 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 COX7A2P14406 83 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 CD46P15529 392 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 HMOX2P30519 316 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 PRKAA2P54646 552 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 HNRNPH2P55795 449 aaKnown RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 CCDC153Q494R4 210 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 C18orf63Q68DL7 685 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 SPINK14Q6IE38 97 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 ZYG11AQ6WRX3 759 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 PAGE2Q7Z2X7 111 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 C4orf33Q8N1A6 199 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 MDS2Q8NDY4 140 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 NFAM1Q8NET5 270 aaPredicted RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 OR14A16Q8NHC5 309 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 DNAJB8Q8NHS0 232 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 DAZLQ92904 295 aaKnown RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 DGAT2Q96PD7 388 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 ZNF382Q96SR6 550 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 RPF2Q9H7B2 306 aaKnown RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 FARSBQ9NSD9 589 aaKnown RBP14.35□□□□□ -0.11
VARS-219ENST00000461328 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 PPT2Q9UMR5 302 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 ATG4BQ9Y4P1 393 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 CLDN16Q9Y5I7 305 aa14.35□□□□□ -0.11
VARS-219ENST00000461328 A0A0A6YYD5 115 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 A0A1B0GTL3 188 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 C17orf105B2RV13 164 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 DYRK3O43781 588 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 FGF17O60258 216 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 PDYNP01213 254 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 KRT6AP02538 564 aa14.34□□□□□ -0.11
VARS-219ENST00000461328 KRT6BP04259 564 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms