RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 B3GNT8Q7Z7M8 397 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 KRTCAP2Q8N6L1 136 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 C19orf47Q8N9M1 422 aaKnown RBP9.8□□□□□ -0.84
USP39-210ENST00000459775 MFSD9Q8NBP5 474 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 ZCCHC10Q8TBK6 192 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SLC13A3Q8WWT9 602 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 UCN3Q969E3 161 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 TSSK3Q96PN8 268 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 C17orf62Q9BQA9 187 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SIKE1Q9BRV8 207 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 CCDC28BQ9BUN5 200 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 MS4A8Q9BY19 250 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 RHBGQ9H310 441 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 ZNF385DQ9H6B1 395 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 TMEM9BQ9NQ34 198 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 LHX9Q9NQ69 397 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SEMA3GQ9NS98 782 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 RIC8BQ9NVN3 520 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 C1orf109Q9NX04 203 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SOHLH2Q9NX45 425 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 HEATR5BQ9P2D3 2071 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 LRIT2A6NDA9 550 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 WASHC1A8K0Z3 465 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 PLPP1O14494 284 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 KLF4O43474 513 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 HYAL3O43820 417 aaPredicted RBP9.8□□□□□ -0.84
USP39-210ENST00000459775 MED26O95402 600 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 KLK1P06870 262 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SERPINA6P08185 405 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 CXCR2P25025 360 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 GRK3P35626 688 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 EPHA4P54764 986 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 VBP1P61758 197 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SQLEQ14534 574 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 PRSS41Q7RTY9 318 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SLC51BQ86UW2 128 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 LIX1Q8N485 282 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 FBXO27Q8NI29 283 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 ZUFSPQ96AP4 578 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 ZFYVE21Q9BQ24 234 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 LRRN3Q9H3W5 708 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 ACTL8Q9H568 366 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 NEUROD4Q9HD90 331 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 CRNNQ9UBG3 495 aaPredicted RBP9.8□□□□□ -0.84
USP39-210ENST00000459775 TRIM33Q9UPN9 1127 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 GPR45Q9Y5Y3 372 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 SESN1Q9Y6P5 492 aa9.8□□□□□ -0.84
USP39-210ENST00000459775 ACOD1A6NK06 481 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 FOXE1O00358 373 aaPredicted RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 TSPAN9O75954 239 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ALOX5P09917 674 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 BCKDHAP12694 445 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 FOLR1P15328 257 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 FUT4P22083 530 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 IL12AP29459 219 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 PIK3CBP42338 1070 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 CD97P48960 835 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 SLC26A5P58743 744 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ERVK-8P63133 956 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 KCNC4Q03721 635 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 KLF10Q13118 480 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 GPR19Q15760 415 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 TOR1AIP1Q5JTV8 583 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 KHDRBS2Q5VWX1 349 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 SLC6A19Q695T7 634 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ANKRD26P1Q6NSI1 321 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 NOXRED1Q6NXP6 359 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 GK5Q6ZS86 529 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 COMMD6Q7Z4G1 85 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ZFAND4Q86XD8 727 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 MCATQ8IVS2 390 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 NAXDQ8IW45 347 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 UNC13CQ8NB66 2214 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ADAMTS18Q8TE60 1221 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 CHTF18Q8WVB6 975 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 REPS1Q96D71 796 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ZDHHC12Q96GR4 267 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 MED30Q96HR3 178 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 TEFMQ96QE5 360 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 ZNF717Q9BY31 904 aaPredicted RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 DENND2DQ9H6A0 471 aaPredicted RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 C1GALT1Q9NS00 363 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 CCDC167Q9P0B6 97 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 AP1M2Q9Y6Q5 423 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 BAHCC1Q9P281 2608 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 FAM208BQ5VWN6 2430 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 TLCD2A6NGC4 264 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ZNF860A6NHJ4 632 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 M0R3H8 397 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ERI3O43414 337 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 GUCY1B2O75343 617 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 PRKRAO75569 313 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ZNF888P0CJ79 500 aaPredicted RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 T-ENOLP0DO92 83 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 HSD3B1P14060 373 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 CKMT2P17540 419 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 SDC1P18827 310 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 GPX3P22352 226 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 GPLD1P80108 840 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms