RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 CSTF3Q12996 717 aaKnown RBP13.17□□□□□ -0.3
LINC01563-201ENST00000456235 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 KANK2Q63ZY3 851 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 DDIASQ8IXT1 998 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 KBTBD2Q8IY47 623 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF843Q8N446 348 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 PLPP5Q8NEB5 264 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 OR2T11Q8NH01 316 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 ANKRD9Q96BM1 317 aaPredicted RBP13.17□□□□□ -0.3
LINC01563-201ENST00000456235 C20orf27Q9GZN8 174 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 SLC25A18Q9H1K4 315 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 ADNPQ9H2P0 1102 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF552Q9H707 407 aaPredicted RBP13.17□□□□□ -0.3
LINC01563-201ENST00000456235 DDX31Q9H8H2 851 aaKnown RBP13.17□□□□□ -0.3
LINC01563-201ENST00000456235 BRF2Q9HAW0 419 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
LINC01563-201ENST00000456235 RIC8BQ9NVN3 520 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 PLA2G3Q9NZ20 509 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 VPS29Q9UBQ0 182 aa13.17□□□□□ -0.3
LINC01563-201ENST00000456235 MRPS33Q9Y291 106 aaKnown RBP13.17□□□□□ -0.3
LINC01563-201ENST00000456235 HRKO00198 91 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 PGRMC2O15173 223 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 TM9SF1O15321 606 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 PROM1O43490 865 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 PCDH7O60245 1069 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 HSPA4LO95757 839 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 JUNP05412 331 aaKnown RBP13.16□□□□□ -0.3
LINC01563-201ENST00000456235 DHRS4L1P0CG22 281 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 UROSP10746 265 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 IL10P22301 178 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ALDH9A1P49189 494 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 MAPK12P53778 367 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 SLC26A5P58743 744 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ASPHQ12797 758 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 MYBPC3Q14896 1274 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 MRM1Q6IN84 353 aaKnown RBP13.16□□□□□ -0.3
LINC01563-201ENST00000456235 HDXQ7Z353 690 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 PRICKLE2Q7Z3G6 844 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 CROCCP2Q86T23 111 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF595Q8IYB9 648 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 THAP3Q8WTV1 239 aaPredicted RBP13.16□□□□□ -0.3
LINC01563-201ENST00000456235 TWIST2Q8WVJ9 160 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 LPAR4Q99677 370 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 LHPPQ9H008 270 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 RPF2Q9H7B2 306 aaKnown RBP13.16□□□□□ -0.3
LINC01563-201ENST00000456235 LIN28AQ9H9Z2 209 aaKnown RBP13.16□□□□□ -0.3
LINC01563-201ENST00000456235 LYARQ9NX58 379 aaKnown RBP13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ANKRD10Q9NXR5 420 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ZDHHC2Q9UIJ5 367 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 PHF11Q9UIL8 331 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 MMACHCQ9Y4U1 282 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 ACTL7BQ9Y614 415 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 SPACA6W5XKT8 324 aa13.16□□□□□ -0.3
LINC01563-201ENST00000456235 GNG14A0A1W2PPG7 69 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 SAGE2PA6NJ88 616 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 CLDN4O14493 209 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 PRKNO60260 465 aaPredicted RBP13.15□□□□□ -0.3
LINC01563-201ENST00000456235 IL3P08700 152 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 HSD17B7P56937 341 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
LINC01563-201ENST00000456235 GALNTL6Q49A17 601 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 PRR30Q53SZ7 412 aaPredicted RBP13.15□□□□□ -0.3
LINC01563-201ENST00000456235 IRAK1BP1Q5VVH5 260 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 C16orf47Q6ZP98 133 aaPredicted RBP13.15□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF781Q8N8C0 355 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 ADAMTS18Q8TE60 1221 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 CHTF18Q8WVB6 975 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 PSMF1Q92530 271 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 NCLNQ969V3 563 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 NPAS2Q99743 824 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 STMN4Q9H169 189 aaPredicted RBP13.15□□□□□ -0.3
LINC01563-201ENST00000456235 KCNK13Q9HB14 408 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF446Q9NWS9 450 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 AHSPQ9NZD4 102 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 HEY2Q9UBP5 337 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 ZNF223Q9UK11 482 aaPredicted RBP13.15□□□□□ -0.3
LINC01563-201ENST00000456235 DNAJC15Q9Y5T4 150 aa13.15□□□□□ -0.3
LINC01563-201ENST00000456235 TRBV11-1A0A0K0K1C0 115 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 A0A1W2PQ72 361 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 C17orf105B2RV13 164 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 KALRNO60229 2985 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 CTNSO60931 367 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 SERPINE1P05121 402 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 SERPINA7P05543 415 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 TNNI3P19429 210 aa13.14□□□□□ -0.31
LINC01563-201ENST00000456235 TIA1P31483 386 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC01563-201ENST00000456235 BUD31P41223 144 aaPredicted RBP13.14□□□□□ -0.31
LINC01563-201ENST00000456235 TSFMP43897 325 aaKnown RBP13.14□□□□□ -0.31
LINC01563-201ENST00000456235 TAS2R50P59544 299 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms