RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 NDUFS4O43181 175 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 GALR3O60755 368 aaPredicted RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC19A2O60779 497 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 TSPAN12O95859 305 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CRYABP02511 175 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 AMY2AP04746 511 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 FHP07954 510 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF888P0CJ79 500 aaPredicted RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MYBL2P10244 700 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ALOX12P18054 663 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 PGAM1P18669 254 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 AMY2BP19961 511 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MAOAP21397 527 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 FDXRP22570 491 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 HRH2P25021 359 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 HTR1EP28566 365 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 TNFRSF8P28908 595 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 RFC3P40938 356 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ELK3P41970 407 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 GDF5P43026 501 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CA7P43166 264 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 RGS4P49798 205 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 AGTR2P50052 363 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MECP2P51608 486 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CCR8P51685 355 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 NR0B1P51843 470 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 GP2P55259 537 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CORO7P57737 925 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 RAB8AP61006 207 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ADORA2A-AS1P86434 159 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ALDH6A1Q02252 535 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CSHL1Q14406 222 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 USP10Q14694 798 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 RBBP5Q15291 538 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MEP1AQ16819 746 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 FBXO48Q5FWF7 155 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SPANXN3Q5MJ09 141 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 DUPD1Q68J44 220 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 GALNTL5Q7Z4T8 443 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 RPS19BP1Q86WX3 136 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 TICAM1Q8IUC6 712 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 KLHL7Q8IXQ5 586 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 LMNTD2Q8IXW0 634 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC34A3Q8N130 599 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MYO1HQ8N1T3 1032 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SPATA6LQ8N4H0 392 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CPSF7Q8N684 471 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ANKRD53Q8N9V6 530 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MDS2Q8NDY4 140 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ABHD11Q8NFV4 315 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 OR4K1Q8NGD4 311 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 OR56A3Q8NH54 315 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ABHD4Q8TB40 342 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 M1APQ8TC57 530 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ACTRT1Q8TDG2 376 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 UTP15Q8TED0 518 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 NEIL2Q969S2 332 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ESAMQ96AP7 390 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 TBC1D20Q96BZ9 403 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CERS2Q96G23 380 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CAPZA3Q96KX2 299 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 LPAR4Q99677 370 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 UTP23Q9BRU9 249 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 WDR83Q9BRX9 315 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM167BQ9BTA0 163 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SGPP1Q9BX95 441 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 AICDAQ9GZX7 198 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 PCBD2Q9H0N5 130 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 LIN28AQ9H9Z2 209 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MMP25Q9NPA2 562 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 NECTIN3Q9NQS3 549 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 LRFN1Q9P244 771 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 C19orf25Q9UFG5 118 aaPredicted RBP4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ASIC3Q9UHC3 531 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 TEKT2Q9UIF3 430 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 ITGB1BP2Q9UKP3 347 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 CHMP2BQ9UQN3 213 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC22A14Q9Y267 594 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 PSAT1Q9Y617 370 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC22A7Q9Y694 548 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 X6R8D5 127 aa4.39□□□□□ -1.71
GTF3C3-208ENST00000455546 MED12Q93074 2177 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ITPR2Q14571 2701 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TRBC2A0A5B9 178 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NPEPPSL1A6NEC2 478 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NCF1BA6NI72 391 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 USP27XA6NNY8 438 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NCF1CA8MVU1 366 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 MAGEB17A8MXT2 336 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 C4orf51C9J302 202 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 EIF3FO00303 357 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SCDO00767 359 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NDC80O14777 642 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ASNA1O43681 348 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NEURL1O76050 574 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 PDE9AO76083 593 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SP1P08047 785 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 DBHP09172 617 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC35G6P0C7Q6 338 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms