RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 SLC30A8Q8IWU4 369 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 SLC22A18ASQ8N1D0 253 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 SRFBP1Q8NEF9 429 aaKnown RBP8.39□□□□□ -1.07
RPE-216ENST00000454822 PSMA8Q8TAA3 256 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 LZICQ8WZA0 190 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 NCSTNQ92542 709 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 SLC22A18Q96BI1 424 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 OR2A14Q96R47 310 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 PHF7Q9BWX1 381 aaPredicted RBP8.39□□□□□ -1.07
RPE-216ENST00000454822 TWSG1Q9GZX9 223 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 GLIPR2Q9H4G4 154 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 RUBCNLQ9H714 662 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 THUMPD1Q9NXG2 353 aaKnown RBP8.39□□□□□ -1.07
RPE-216ENST00000454822 RAB23Q9ULC3 237 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 ANGPT4Q9Y264 503 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 ATG4BQ9Y4P1 393 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 PCDHGB3Q9Y5G1 929 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 PCDHGA8Q9Y5G5 932 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 CEPT1Q9Y6K0 416 aa8.39□□□□□ -1.07
RPE-216ENST00000454822 CCDC160A6NGH7 325 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 PRAMEF25A6NGN4 478 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 GLOD5A6NK44 160 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 B4GAT1O43505 415 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 GUCY1B2O75343 617 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 C9P02748 559 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ITGAMP11215 1152 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 CHRNB1P11230 501 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 RRM2P31350 389 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 OR1E2P47887 323 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 HLCSP50747 726 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 TPD52P55327 224 aaPredicted RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 STXBP1P61764 594 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 ILF3Q12906 894 aaKnown RBP eCLIP8.38□□□□□ -1.074e-7■■■■□ 24.8
RPE-216ENST00000454822 KIR2DS3Q14952 304 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 CYP27C1Q4G0S4 372 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 REEP3Q6NUK4 255 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 VN1R4Q7Z5H5 301 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 TRIM73Q86UV7 250 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 TRIM48Q8IWZ4 208 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 PIK3C3Q8NEB9 887 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 GPBAR1Q8TDU6 330 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 SLC38A5Q8WUX1 472 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 NMD3Q96D46 503 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 AMDHD1Q96NU7 426 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 FCRL4Q96PJ5 515 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 EPYCQ99645 322 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 TCEAL2Q9H3H9 227 aaPredicted RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 A4GALTQ9NPC4 353 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 SLC2A4RGQ9NR83 387 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 C2orf42Q9NWW7 574 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 FBXW2Q9UKT8 454 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 DMTF1Q9Y222 760 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 PCDHGA2Q9Y5H1 932 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 FANCMQ8IYD8 2048 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 OR6C74A6NCV1 312 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ENO4A6NNW6 628 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 TNFSF14O43557 240 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 SH3BP5O60239 455 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 PRAMEF10O60809 474 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ERAL1O75616 437 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 FESP07332 822 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 TFPTP0C1Z6 253 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 SRFP11831 508 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 UGT2B7P16662 529 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 POLR2CP19387 275 aaPredicted RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 CERS1P27544 350 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 NCBP2P52298 156 aaKnown RBP eCLIP8.38□□□□□ -1.071e-8■□□□□ 9.8
RPE-216ENST00000454822 ISL1P61371 349 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 RPS15AP62244 130 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 BTN3A2P78410 334 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 IL1RL1Q01638 556 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 CD47Q08722 323 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 EIF2B5Q13144 721 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 TDGQ13569 410 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 GPR18Q14330 331 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 MEP1AQ16819 746 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 CTU2Q2VPK5 515 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 ZNF542PQ5EBM4 170 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 RBM48Q5RL73 367 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 C6orf141Q5SZD1 244 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ZNF691Q5VV52 312 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 C18orf63Q68DL7 685 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ARMC8Q8IUR7 673 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ATG16L2Q8NAA4 619 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 SMYD1Q8NB12 490 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 KCT2Q8NC54 265 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 CHDHQ8NE62 594 aaPredicted RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 ZFPM2Q8WW38 1151 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 PATE1Q8WXA2 126 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 HDAC2Q92769 488 aaKnown RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 RAB8BQ92930 207 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ZNF300Q96RE9 604 aaPredicted RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 BBS4Q96RK4 519 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 ZNF347Q96SE7 839 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 GPR174Q9BXC1 333 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 NPLQ9BXD5 320 aaPredicted RBP8.38□□□□□ -1.07
RPE-216ENST00000454822 PRO3102Q9H379 93 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 RIBC2Q9H4K1 309 aa8.38□□□□□ -1.07
RPE-216ENST00000454822 UBE2ZQ9H832 354 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms