RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 DEFB119Q8N690 84 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 FRMD1Q8N878 549 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 OR8K5Q8NH50 307 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 TTLL2Q9BWV7 592 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 HDHD2Q9H0R4 259 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 CLEC4MQ9H2X3 399 aaPredicted RBP10.68□□□□□ -0.7
DDR1-240ENST00000454612 ELAC1Q9H777 363 aaKnown RBP10.68□□□□□ -0.7
DDR1-240ENST00000454612 ATPIF1Q9UII2 106 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 RNF6Q9Y252 685 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 IRAK3Q9Y616 596 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 SPIN1Q9Y657 262 aaPredicted RBP10.68□□□□□ -0.7
DDR1-240ENST00000454612 CCDC88CQ9P219 2028 aa10.68□□□□□ -0.7
DDR1-240ENST00000454612 NYNRINQ9P2P1 1898 aaKnown RBP10.68□□□□□ -0.7
DDR1-240ENST00000454612 H0YAE9 185 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 NDUFS4O43181 175 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 PSIP1O75475 530 aaKnown RBP10.67□□□□□ -0.7
DDR1-240ENST00000454612 CDC123O75794 336 aaPredicted RBP10.67□□□□□ -0.7
DDR1-240ENST00000454612 CD9P21926 228 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 TIA1P31483 386 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDR1-240ENST00000454612 CNR2P34972 360 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 SOX3P41225 446 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZNF763Q0D2J5 394 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 STK11Q15831 433 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZNF805Q5CZA5 627 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ERICH5Q6P6B1 374 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 FAM131AQ6UXB0 335 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZNF730Q6ZMV8 503 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 SPATC1Q76KD6 591 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 DGLUCYQ7Z3D6 616 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 PIK3R3Q92569 461 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 NIPSNAP1Q9BPW8 284 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 SCN2AQ99250 2005 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 OR6C70A6NIJ9 312 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 MEN1O00255 615 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 RASGRP1O95267 797 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 PRNPP04156 253 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 HTR2BP41595 481 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 NRIP1P48552 1158 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 MVKQ03426 396 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 MESP2Q0VG99 397 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZZZ3Q8IYH5 903 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 TCEAL8Q8IYN2 117 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 CPA6Q8N4T0 437 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 OR9A1PQ8NGU1 263 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 BPIFB1Q8TDL5 484 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 DNASE1L2Q92874 299 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 FCRL4Q96PJ5 515 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 GAL3ST1Q99999 423 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 REEP4Q9H6H4 257 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDR1-240ENST00000454612 PCDHGA10Q9Y5H3 936 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 DLGAP1O14490 977 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 PDPK1O15530 556 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 PRSS23O95084 383 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 KCNK5O95279 499 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ADH1CP00326 375 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 CEBPBP17676 345 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 NTSP30990 170 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 FAM26DQ5JW98 314 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 TPRG1LQ5T0D9 272 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZNF544Q6NX49 715 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 ZC3H14Q6PJT7 736 aaKnown RBP10.67□□□□□ -0.7
DDR1-240ENST00000454612 LIPIQ6XZB0 460 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 KRT73Q86Y46 540 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 RAB43Q86YS6 212 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 OR8H3Q8N146 312 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 BADQ92934 168 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 TIFAQ96CG3 184 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 CCDC120Q96HB5 630 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 DIRAS2Q96HU8 199 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 NARS2Q96I59 477 aaKnown RBP10.67□□□□□ -0.7
DDR1-240ENST00000454612 LMLNQ96KR4 655 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 KXD1Q9BQD3 176 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 CPPED1Q9BRF8 314 aaPredicted RBP10.67□□□□□ -0.7
DDR1-240ENST00000454612 NTMT1Q9BV86 223 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 SLC6A16Q9GZN6 736 aa10.67□□□□□ -0.7
DDR1-240ENST00000454612 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
DDR1-240ENST00000454612 ARNTLO00327 626 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 IMPA1P29218 277 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CAV3P56539 151 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 PFN3P60673 137 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 C5orf22Q49AR2 442 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CRTC2Q53ET0 693 aaPredicted RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 RNF44Q7L0R7 432 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 AMIGO1Q86WK6 493 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 ANKRD13BQ86YJ7 626 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 ZNF675Q8TD23 568 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 MSANTD3Q96H12 275 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 DOHHQ9BU89 302 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 SPNS1Q9H2V7 528 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CWH43Q9H720 699 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CCDC59Q9P031 241 aaKnown RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 ZNF282Q9UDV7 671 aaPredicted RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 PLEKHM1Q9Y4G2 1056 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 PTPRZ1P23471 2315 aaPredicted RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 LRRC72A6NJI9 287 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CCDC85CA6NKD9 419 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CTDSP2O14595 271 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms