RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 MARK4Q96L34 752 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 LURAP1Q96LR2 239 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 FICDQ9BVA6 458 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 C1QTNF4Q9BXJ3 329 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 POLR1EQ9GZS1 481 aaKnown RBP3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 WWP1Q9H0M0 922 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 VPS33BQ9H267 617 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF319Q9P2F9 582 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 POLKQ9UBT6 870 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 TEKT2Q9UIF3 430 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 MRTO4Q9UKD2 239 aaKnown RBP3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 FOXJ3Q9UPW0 622 aa3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 KLF2Q9Y5W3 355 aaPredicted RBP3.69□□□□□ -1.82
HMGN3P1-201ENST00000453847 ASB14A6NK59 587 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 ANKRD30BLA7E2S9 258 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 C16orf97H3BN30 126 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 EXTL3O43909 919 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 PAK4O96013 591 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 OPN1MWP04001 364 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 VTNP04004 478 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 CA3P07451 260 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 APRTP07741 180 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 NGFRP08138 427 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 HIST1H2AGP0C0S8 130 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 FAM157CP0CG43 387 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 OPN1MW2P0DN77 364 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 OPN1MW3P0DN78 364 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 CALCBP10092 127 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 RRASP10301 218 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 GLRA2P23416 452 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 MAT2AP31153 395 aaKnown RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 SOX3P41225 446 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 PTGFRP43088 359 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 SLC1A6P48664 564 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 LBX1P52954 281 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 CNTN2Q02246 1040 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 KEAP1Q14145 624 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMEM132DQ14C87 1099 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 LRIT3Q3SXY7 679 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMEM41BQ5BJD5 291 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 SPATA46Q5T0L3 261 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 ASPHD2Q6ICH7 369 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 CDC42EP5Q6NZY7 148 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 SLC39A4Q6P5W5 647 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 NFE4Q86UQ8 179 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 SPATA2LQ8IUW3 424 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 DND1Q8IYX4 353 aaKnown RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 GCNT2Q8N0V5 402 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 NAGSQ8N159 534 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZCCHC7Q8N3Z6 543 aaKnown RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 TCEANCQ8N8B7 351 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 CCDC197Q8NCU1 140 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 STKLD1Q8NE28 680 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF397Q8NF99 534 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 OR2T11Q8NH01 316 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 LMO3Q8TAP4 145 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 GANCQ8TET4 914 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 U2AF1L4Q8WU68 220 aaKnown RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 CASP10Q92851 521 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 OSTF1Q92882 214 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 HIST1H2ACQ93077 130 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 AZIN2Q96A70 460 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMEM143Q96AN5 459 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 C2orf48Q96LS8 159 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 TTC25Q96NG3 672 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 ACCSQ96QU6 501 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 GPA33Q99795 319 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 UPF2Q9HAU5 1272 aaKnown RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 ECHDC1Q9NTX5 307 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 P2RX2Q9UBL9 471 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 DBF4Q9UBU7 674 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 C19orf25Q9UFG5 118 aaPredicted RBP3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 MIOXQ9UGB7 285 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 GRID1Q9ULK0 1009 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 KIF3AQ9Y496 699 aa3.68□□□□□ -1.82
HMGN3P1-201ENST00000453847 WASHC1A8K0Z3 465 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 WASH3PC4AMC7 463 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 LGALS8O00214 317 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 CXCL11O14625 94 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 EPHB6O15197 1021 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 PALMO75781 387 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 ASNSP08243 561 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 GSTA2P09210 222 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 NPY2RP49146 381 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 NUMBP49757 651 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 DVL1P1P54792 670 aaPredicted RBP3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 INHBEP58166 350 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 HMGN5P82970 282 aaKnown RBP3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 CDR2Q01850 454 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 HSPA14Q0VDF9 509 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 IL24Q13007 206 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 TAF13Q15543 124 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF699Q32M78 642 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 CCDC152Q4G0S7 254 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 SPANXN4Q5MJ08 99 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 AWAT2Q6E213 333 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 WASH2PQ6VEQ5 465 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 RFPL4BQ6ZWI9 263 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms