RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ADGRE4PQ86SQ3 457 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 C16orf71Q8IYS4 520 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM123Q8N131 208 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 RYBPQ8N488 228 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PARP16Q8N5Y8 322 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 SMYD1Q8NB12 490 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM104Q8NE00 496 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 FBXL13Q8NEE6 735 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR7G1Q8NGA0 311 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR4N2Q8NGD1 307 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 UBTD2Q8WUN7 234 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PIGCQ92535 297 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 P2RX5Q93086 422 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC38A4Q969I6 547 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 WBP2Q969T9 261 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 MRGPRFQ96AM1 343 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PYCR2Q96C36 320 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 RNF183Q96D59 192 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPP1R16AQ96I34 528 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 GPR137Q96N19 417 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 GUCD1Q96NT3 240 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 OMDQ99983 421 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM246Q9BRR3 403 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PELOQ9BRX2 385 aaKnown RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM175Q9BSA9 504 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 C16orf70Q9BSU1 422 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 ST6GALNAC5Q9BVH7 336 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 HINT2Q9BX68 163 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC2A11Q9BYW1 496 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 TM6SF2Q9BZW4 377 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 TRIM9Q9C026 710 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 AMBRA1Q9C0C7 1298 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 POLR3FQ9H1D9 316 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 GOLPH3Q9H4A6 298 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 MTHFD2LQ9H903 347 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 NTN4Q9HB63 628 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 MRM3Q9HC36 420 aaKnown RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 NT5MQ9NPB1 228 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PXMP2Q9NR77 195 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 OSER1Q9NX31 292 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 RBAKQ9NYW8 714 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 PTTG3PQ9NZH4 202 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 FLRT1Q9NZU1 646 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 P2RX2Q9UBL9 471 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 VANGL2Q9ULK5 521 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 FLVCR2Q9UPI3 526 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 RASD1Q9Y272 281 aa4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 RBMX2Q9Y388 322 aaKnown RBP4.14□□□□□ -1.75
HMGB3P21-201ENST00000452483 CUX2O14529 1486 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 LOC105371242A0A075B767 164 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A0U1RQF3 1178 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 MYADML2A6NDP7 307 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SERPINE3A8MV23 424 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM189-UBE2V1I3L0A0 370 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 GOLGA8RI6L899 631 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PRYO14603 147 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 FOXS1O43638 330 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 KDELR3O43731 214 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDC14BO60729 498 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RPS6KA5O75582 802 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF189O75820 626 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RBBP9O75884 186 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TSPAN12O95859 305 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 GPANK1O95872 356 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PGK1P00558 417 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 HLA-DRAP01903 254 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SERPIND1P05546 499 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ANXA4P09525 319 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 NCK1P16333 377 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CR2P20023 1033 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CYP3A5P20815 502 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ACKR3P25106 362 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SSTR1P30872 391 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CASP14P31944 242 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 MAP2K2P36507 400 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCT3P49368 545 aaKnown RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TNFSF10P50591 281 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC7A2P52569 658 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 NDST2P52849 883 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 LIMK2P53671 638 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 GEMP55040 296 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 FKBP1BP68106 108 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SULT2A1Q06520 285 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 IL10RBQ08334 325 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ILF2Q12905 390 aaKnown RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 UBE2V1Q13404 147 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ILKQ13418 452 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 NFATC2Q13469 925 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 VEZF1Q14119 521 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RBBP7Q16576 425 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CYP1B1Q16678 543 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SGSM1Q2NKQ1 1148 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 DCAF4L1Q3SXM0 396 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 HSDL1Q3SXM5 330 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLK5Q496M5 336 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SBK1Q52WX2 424 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC25A53Q5H9E4 307 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 EPHA10Q5JZY3 1008 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TREML2Q5T2D2 321 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms