RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RAB30Q15771 203 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZYXQ15942 572 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 HAGHQ16775 308 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 UAP1L1Q3KQV9 507 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 EIPR1Q53HC9 387 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CYBRD1Q53TN4 286 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 DALRD3Q5D0E6 543 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 TRIM61Q5EBN2 209 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 XKR3Q5GH77 459 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC27A3Q5K4L6 730 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PDSS1Q5T2R2 415 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RIPPLY2Q5TAB7 128 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZDHHC20Q5W0Z9 365 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FUT10Q6P4F1 479 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ULK3Q6PHR2 472 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CNIH2Q6PI25 160 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 USP17L2Q6R6M4 530 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ASB18Q6ZVZ8 466 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 USP51Q70EK9 711 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 STRADAQ7RTN6 431 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 B3GNT8Q7Z7M8 397 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GPR149Q86SP6 731 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MCEMP1Q8IX19 187 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GPR65Q8IYL9 337 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ADGRG5Q8IZF4 528 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 EIF4E3Q8N5X7 224 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 CELF2-AS1Q8N7Q2 184 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TCEANCQ8N8B7 351 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SUMF2Q8NBJ7 301 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC44A5Q8NCS7 719 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TTC16Q8NEE8 873 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MFSD8Q8NHS3 518 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MAPK15Q8TD08 544 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 STK35Q8TDR2 534 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 STYXQ8WUJ0 223 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RAB24Q969Q5 203 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 L3HYPDHQ96EM0 354 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM176AQ96HP8 235 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MFSD14AQ96MC6 490 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MCCC1Q96RQ3 725 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 INTS14Q96SY0 518 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ARHGAP39Q9C0H5 1083 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SRRQ9GZT4 340 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.12□□□□□ -2.07
USP53-202ENST00000450251 ANKRD19PQ9H560 264 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CLMPQ9H6B4 373 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ALG9Q9H6U8 611 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 LRTM1Q9HBL6 345 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KCNJ16Q9NPI9 418 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 EQTNQ9NQ60 294 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PLCXD1Q9NUJ7 323 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 LUZP4Q9P127 313 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 STRAPQ9Y3F4 350 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 ATG4BQ9Y4P1 393 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TAF6LQ9Y6J9 622 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ECM29Q5VYK3 1845 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PIEZO1Q92508 2521 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MAST2Q6P0Q8 1798 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A0A1B0GTQ1 180 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A0A1B0GUH1 482 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A0A1W2PQL4 384 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 CDHR4A6H8M9 788 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TRABD2BA6NFA1 517 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC15A5A6NIM6 579 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GJE1A6NN92 205 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PPP5D1E7EU14 171 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACOT7O00154 380 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 AP4M1O00189 453 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MEN1O00255 615 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ANKRD28O15084 1053 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 EEF1E1O43324 174 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 GCP02774 474 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ESR1P03372 595 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MT-ND4LP03901 98 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CSF2P04141 144 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 METTL15P1P0C7V9 234 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FGFR1P11362 822 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF7P17097 686 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 NTSP30990 170 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 BMI1P35226 326 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CSKP41240 450 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 BCAMP50895 628 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC16A1P53985 500 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OR10A3P58181 314 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TAS2R40P59535 323 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GTF2BQ00403 316 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MXD1Q05195 221 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CLCQ05315 142 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NPRL3Q12980 569 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KLF1Q13351 362 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 SNTB2Q13425 540 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 KIAA0141Q14154 515 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM132DQ14C87 1099 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 LARS2Q15031 903 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 TAF1AQ15573 450 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 CHRNA2Q15822 529 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF239Q16600 458 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF630Q2M218 657 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM162BQ5T6X4 162 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PLAG1Q6DJT9 500 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms