RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SKA2Q8WVK7 121 aaPredicted RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 TFB1MQ8WVM0 346 aaKnown RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 GCDHQ92947 438 aaPredicted RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 NCLNQ969V3 563 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 ZC3HAV1LQ96H79 300 aaKnown RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 MRFAP1L1Q96HT8 127 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 SLC39A3Q9BRY0 314 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 TMEM204Q9BSN7 226 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 CARD6Q9BX69 1037 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 EML4Q9HC35 981 aaKnown RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 NLE1Q9NVX2 485 aaPredicted RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 TAB2Q9NYJ8 693 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 ELOVL5Q9NYP7 299 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 RSPH14Q9UHP6 348 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 FEZ2Q9UHY8 353 aaPredicted RBP7.17□□□□□ -1.26
LINC01961-201ENST00000449954 LIPT1Q9Y234 373 aa7.17□□□□□ -1.26
LINC01961-201ENST00000449954 MALRD1Q5VYJ5 2156 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 A8MUA0 341 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 PSMD12O00232 456 aaPredicted RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 WWP2O00308 870 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 PRKNO60260 465 aaPredicted RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 AVILO75366 819 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 CRHP06850 196 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 POU2F1P14859 743 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 PPP3CBP16298 524 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 CHMP24386 653 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 KDELR1P24390 212 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 HRH2P25021 359 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 AOAHP28039 575 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ADRA1AP35348 466 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 HSD17B2P37059 387 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 PIGAP37287 484 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 CDKN1AP38936 164 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 NR2C2P49116 596 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 GPR143P51810 404 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ID3Q02535 119 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 MSLNQ13421 630 aaPredicted RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 CCSMST1Q4G0I0 132 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ERICH6BQ5W0A0 696 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 SLC22A10Q63ZE4 541 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 HSDL2Q6YN16 418 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ZNF550Q7Z398 422 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 IRF2BP2Q7Z5L9 587 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 LDB1Q86U70 411 aaPredicted RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 PLD3Q8IV08 490 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 GCNT2Q8N0V5 402 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ZNF567Q8N184 647 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 FBXO15Q8NCQ5 510 aaPredicted RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 SEMA6DQ8NFY4 1073 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 OR5T3Q8NGG3 340 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 PAQR8Q8TEZ7 354 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 AKAP1Q92667 903 aaKnown RBP eCLIP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 FBXW5Q969U6 566 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ANKRD9Q96BM1 317 aaPredicted RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 INTS12Q96CB8 462 aaKnown RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 WDYHV1Q96HA8 205 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 MAK16Q9BXY0 300 aaKnown RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ISCUQ9H1K1 167 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 CLK4Q9HAZ1 481 aaKnown RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ZNHIT6Q9NWK9 470 aaKnown RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 AIPL1Q9NZN9 384 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 TRHDEQ9UKU6 1024 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 MYO6Q9UM54 1294 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 ZDHHC9Q9Y397 364 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 WIF1Q9Y5W5 379 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 YLPM1P49750 1951 aaKnown RBP7.16□□□□□ -1.26
LINC01961-201ENST00000449954 MED12Q93074 2177 aa7.16□□□□□ -1.26
LINC01961-201ENST00000449954 NCKAP5O14513 1909 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 SCN3AQ9NY46 2000 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 A0A1W2PNV4 684 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 KRT87PA6NCN2 255 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 FRG2CA6NGY1 282 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 KLF4O43474 513 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 CHST10O43529 356 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 GALR3O60755 368 aaPredicted RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 TNFSF13O75888 250 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 CYP1A2P05177 515 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 SOD3P08294 240 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 DANCRP0C864 163 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ARNTP27540 789 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 SLC6A12P48065 614 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 HK2P52789 917 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 NUDT6P53370 316 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 BTG2P78543 158 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 TSTA3Q13630 321 aaPredicted RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 MSMPQ1L6U9 139 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ANKRD20A4Q4UJ75 823 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ANKRD20A2Q5SQ80 823 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ANKRD20A1Q5TYW2 823 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ANKRD20A3Q5VUR7 823 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 NPNTQ6UXI9 565 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ADGRE4PQ86SQ3 457 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 ASPGQ86U10 573 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 DND1Q8IYX4 353 aaKnown RBP7.15□□□□□ -1.26
LINC01961-201ENST00000449954 AFAP1L2Q8N4X5 818 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 KCT2Q8NC54 265 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 OR9A1PQ8NGU1 263 aa7.15□□□□□ -1.26
LINC01961-201ENST00000449954 OR8K3Q8NH51 312 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms