RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 HSDL2Q6YN16 418 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 ZNF227Q86WZ6 799 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 CPSF7Q8N684 471 aaKnown RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 PTGR2Q8N8N7 351 aaPredicted RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 KIF18AQ8NI77 898 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 SORBS1Q9BX66 1292 aaKnown RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 OR8D2Q9GZM6 311 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 ZNF358Q9NW07 568 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 PHF11Q9UIL8 331 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 ERVK-11Q9UQG0 969 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 TSC22D4Q9Y3Q8 395 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 CREBBPQ92793 2442 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 DIDO1Q9BTC0 2240 aaKnown RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 CROCCQ5TZA2 2017 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 A8MVJ9 347 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 PLPP1O14494 284 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 ASNA1O43681 348 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 DYRK3O43781 588 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 WISP2O76076 250 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 CLDN9O95484 217 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 COL6A2P12110 1019 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 DCTP40126 519 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 BUD31P41223 144 aaPredicted RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 MAGEA12P43365 314 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 MEOX1P50221 254 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 ARFIP1P53367 373 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 LGSNQ5TDP6 509 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 GPR180Q86V85 440 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 GPALPP1Q8IXQ4 340 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 GHDCQ8N2G8 530 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 ZCCHC7Q8N3Z6 543 aaKnown RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 CEP112Q8N8E3 955 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 POGLUT1Q8NBL1 392 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 OR5L2Q8NGL0 311 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 PTPMT1Q8WUK0 201 aaPredicted RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 ASB15Q8WXK1 588 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 ISL2Q96A47 359 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 PHF21BQ96EK2 531 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 DGAT2Q96PD7 388 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 RPF2Q9H7B2 306 aaKnown RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 NOL11Q9H8H0 719 aaKnown RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 LIN28AQ9H9Z2 209 aaKnown RBP14.21□□□□□ -0.13
CHD3-205ENST00000449744 TIMMDC1Q9NPL8 285 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 HPF1Q9NWY4 346 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 MYOTQ9UBF9 498 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 XPR1Q9UBH6 696 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 COPS7AQ9UBW8 275 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 ZNF180Q9UJW8 692 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 RNF11Q9Y3C5 154 aa14.21□□□□□ -0.13
CHD3-205ENST00000449744 TEX15Q9BXT5 2789 aa14.21□□□□□ -0.14
CHD3-205ENST00000449744 TRIM49D1C9J1S8 452 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 STX16-NPEPL1H3BU86 382 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 WWP2O00308 870 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 STX16O14662 325 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 TFECO14948 347 aaPredicted RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 PEX1O43933 1283 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 PRKNO60260 465 aaPredicted RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 OR2J2O76002 312 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 ABOP16442 354 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 ECHS1P30084 290 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 CCNG1P51959 295 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 TNFRSF17Q02223 184 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 BIKQ13323 160 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 CUL3Q13618 768 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 C3AR1Q16581 482 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 TTC19Q6DKK2 380 aaPredicted RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 CYP20A1Q6UW02 462 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 C16orf47Q6ZP98 133 aaPredicted RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 SPPL2CQ8IUH8 684 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 SIAH3Q8IW03 269 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 SULF2Q8IWU5 870 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 OR4N5Q8IXE1 308 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 L3MBTL4Q8NA19 623 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 SLC2A12Q8TD20 617 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 SREK1Q8WXA9 508 aaKnown RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 TANKQ92844 425 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 ANKRD9Q96BM1 317 aaPredicted RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 RBM18Q96H35 190 aaKnown RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 CCDC120Q96HB5 630 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 WDR41Q9HAD4 459 aa14.2□□□□□ -0.14
CHD3-205ENST00000449744 LYARQ9NX58 379 aaKnown RBP14.2□□□□□ -0.14
CHD3-205ENST00000449744 EXOC1LA0A1B0GW35 172 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 PRSS44E7EML9 344 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 FOXE1O00358 373 aaPredicted RBP14.19□□□□□ -0.14
CHD3-205ENST00000449744 FGF17O60258 216 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 SNRPAP09012 282 aaKnown RBP14.19□□□□□ -0.14
CHD3-205ENST00000449744 STT3AP46977 705 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 NEK2P51955 445 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 GPR85P60893 370 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 PLIN5Q00G26 463 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 C18orf63Q68DL7 685 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 IL20RBQ6UXL0 311 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 RPTNQ6XPR3 784 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 MDGA2Q7Z553 956 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 MRGPRGQ86SM5 289 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 NUDT13Q86X67 352 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 IFT20Q8IY31 132 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 OR8K3Q8NH51 312 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 WDR20Q8TBZ3 569 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 DCAKDQ8WVC6 231 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms