RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CIDECQ96AQ7 238 aaPredicted RBP13.8□□□□□ -0.2
TNF-208ENST00000449264 MTERF3Q96E29 417 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 OR52E6Q96RD3 313 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 TAAR9Q96RI9 348 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 NPAS2Q99743 824 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 RPF2Q9H7B2 306 aaKnown RBP13.8□□□□□ -0.2
TNF-208ENST00000449264 ATAD3AQ9NVI7 634 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 TRPC4Q9UBN4 977 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 NDUFAF1Q9Y375 327 aa13.8□□□□□ -0.2
TNF-208ENST00000449264 A0A1W2PP18 115 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 ASPDHA6ND91 283 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 AIM2O14862 343 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 B4GALT2O60909 372 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 CALB2P22676 271 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 MXRA7P84157 204 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 ABHD18Q0P651 414 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 ERV3-1Q14264 604 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 PRSS53Q2L4Q9 553 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 SPRED3Q2MJR0 410 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 OR52E8Q6IFG1 317 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 SLC48A1Q6P1K1 146 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 SLC2A7Q6PXP3 512 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 DNAJC14Q6Y2X3 702 aaPredicted RBP13.79□□□□□ -0.2
TNF-208ENST00000449264 ADAMTS18Q8TE60 1221 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 ADAMTS14Q8WXS8 1223 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 DLL3Q9NYJ7 618 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 CCDC88CQ9P219 2028 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 TEX51A0A1B0GUA7 166 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 CYR61O00622 381 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 FBP2O00757 339 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 MRASO14807 208 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 PDPK1O15530 556 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 JRKO75564 520 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 T-ENOLP0DO92 83 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 NUDT2P50583 147 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 PHC1P78364 1004 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 DCDP81605 110 aaKnown RBP13.79□□□□□ -0.2
TNF-208ENST00000449264 ID2Q02363 134 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 BNIP1Q12981 228 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 STX5Q13190 355 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 MAPKAPK3Q16644 382 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 NKAIN1Q4KMZ8 207 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 C6orf10Q5SRN2 563 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 MFSD4BQ5TF39 518 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 CAMKMTQ7Z624 323 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 RETREG3Q86VR2 466 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 OR4N5Q8IXE1 308 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 OR8J2Q8NGG1 315 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 COQ8BQ96D53 544 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 DDA1Q9BW61 102 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 ASPSCR1Q9BZE9 553 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 BHLHE41Q9C0J9 482 aaPredicted RBP13.79□□□□□ -0.2
TNF-208ENST00000449264 CLK4Q9HAZ1 481 aaKnown RBP13.79□□□□□ -0.2
TNF-208ENST00000449264 SLC52A3Q9NQ40 469 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 EHD3Q9NZN3 535 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 CTSFQ9UBX1 484 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 LEF1Q9UJU2 399 aaPredicted RBP13.79□□□□□ -0.2
TNF-208ENST00000449264 ENTPD4Q9Y227 616 aa13.79□□□□□ -0.2
TNF-208ENST00000449264 MRPS33Q9Y291 106 aaKnown RBP13.79□□□□□ -0.2
TNF-208ENST00000449264 SDK2Q58EX2 2172 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 SPTBN4Q9H254 2564 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 DYTNA2CJ06 578 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 MEN1O00255 615 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 LDB3O75112 727 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 FHP07954 510 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 C8orf89P0DMQ9 161 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 DDX5P17844 614 aaKnown RBP13.78□□□□□ -0.2
TNF-208ENST00000449264 RORAP35398 523 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 MPEG1Q2M385 716 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 PAGE3Q5JUK9 113 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 TMEM164Q5U3C3 297 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 COX15Q7KZN9 410 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 PRSS58Q8IYP2 241 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 CLECL1Q8IZS7 167 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 GALNT15Q8N3T1 639 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 GALNT6Q8NCL4 622 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 DNAJB14Q8TBM8 379 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 ZPBPQ9BS86 351 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 TUBB6Q9BUF5 446 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 IL1RL2Q9HB29 575 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 SLC35C2Q9NQQ7 365 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 GIMAP4Q9NUV9 329 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
TNF-208ENST00000449264 FOXJ2Q9P0K8 574 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 CES1P1Q9UKY3 287 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 AHCTF1Q8WYP5 2266 aa13.78□□□□□ -0.2
TNF-208ENST00000449264 MYOCOSA0A1B0GUC4 107 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 A0A1W2PS29 197 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 C9orf172C9J069 976 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 TBX19O60806 448 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 STK17BO94768 372 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 TNFSF15O95150 251 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 UNC5CO95185 931 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 SDHBP21912 280 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms