RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PDZK1P1A8MUH7 402 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 IDH3BO43837 385 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 AP2A2O94973 939 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 BCHEP06276 602 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 FHP07954 510 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 IL7P13232 177 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 TIMP2P16035 220 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 TM4SF4P48230 202 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 METAP1P53582 386 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 PSPHP78330 225 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SLC7A9P82251 487 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF630Q2M218 657 aaPredicted RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SLX4IPQ5VYV7 408 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ZDHHC20Q5W0Z9 365 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 TCTN3Q6NUS6 607 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 TMIGD1Q6UXZ0 262 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ADGRF3Q8IZF5 1079 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 C2orf73Q8N5S3 287 aaPredicted RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF366Q8N895 744 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 FAM46DQ8NEK8 389 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CYB5D2Q8WUJ1 264 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 RAB8BQ92930 207 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CXorf40BQ96DE9 158 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 RNF31Q96EP0 1072 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CEP19Q96LK0 163 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SLC46A2Q9BY10 475 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 MYNNQ9NPC7 610 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SPATA7Q9P0W8 599 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 KCNE2Q9Y6J6 123 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 PNMA8CA0A1B0GUJ8 204 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 ANKRD34BA5PLL1 514 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 RTCAO00442 366 aaKnown RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 TEX28O15482 410 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 TPST2O60704 377 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 IFNW1P05000 195 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 EIF2S1P05198 315 aaKnown RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 PIPP12273 146 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 CCR2P41597 374 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 DCDC1P59894 354 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 DSTNP60981 165 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 SREBF2Q12772 1141 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 ELOAQ14241 798 aaKnown RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 Q5BKY6 102 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 ARSIQ5FYB1 569 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 TRIM40Q6P9F5 258 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 ABI3BPQ7Z7G0 1075 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 METTL3Q86U44 580 aaKnown RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 TRAM1L1Q8N609 369 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 SLC38A5Q8WUX1 472 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 IL17FQ96PD4 163 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 MVB12BQ9H7P6 319 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 PRAMEF27A3QJZ7 478 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 NEDD8-MDP1E9PL57 170 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 TFECO14948 347 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 GUCY1B2O75343 617 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 MFN2O95140 757 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 APOL3O95236 402 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 APOA1P02647 267 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 MSL3P1P0C860 447 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 CD72P21854 359 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 HOXC5Q00444 222 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 RHAGQ02094 409 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 HYAL2Q12891 473 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 TMEM115Q12893 351 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 SPHARQ15513 63 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 LIPKQ5VXJ0 399 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 C12orf73Q69YU5 71 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF517Q6ZMY9 492 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 TECPR1Q7Z6L1 1165 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 TAGAPQ8N103 731 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 UCN3Q969E3 161 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 GLYATL1Q969I3 302 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 GDF15Q99988 308 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 C3orf14Q9HBI5 128 aa13□□□□□ -0.33
POLR1B-209ENST00000448770 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 PCYT1BQ9Y5K3 369 aaPredicted RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
POLR1B-209ENST00000448770 ARRDC5A6NEK1 342 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 K7ESM1 405 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 OSMP13725 252 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 CSTF2P33240 577 aaKnown RBP eCLIP12.99□□□□□ -0.33
POLR1B-209ENST00000448770 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
POLR1B-209ENST00000448770 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 TIMM50Q3ZCQ8 353 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 TMEM201Q5SNT2 666 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF544Q6NX49 715 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 BRAT1Q6PJG6 821 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 MEX3DQ86XN8 651 aaKnown RBP12.99□□□□□ -0.33
POLR1B-209ENST00000448770 SLC39A11Q8N1S5 342 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 TCEANCQ8N8B7 351 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 SYT14Q8NB59 555 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 VN1R2Q8NFZ6 395 aa12.99□□□□□ -0.33
POLR1B-209ENST00000448770 LILRB4Q8NHJ6 448 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms