RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SERTAD2Q14140 314 aa16.47■□□□□ 0.23
DDX56-207ENST00000448192 HSDL2Q6YN16 418 aa16.47■□□□□ 0.23
DDX56-207ENST00000448192 OR4N5Q8IXE1 308 aa16.47■□□□□ 0.23
DDX56-207ENST00000448192 REPS1Q96D71 796 aa16.47■□□□□ 0.23
DDX56-207ENST00000448192 PHF21BQ96EK2 531 aa16.47■□□□□ 0.23
DDX56-207ENST00000448192 ERVK-11Q9UQG0 969 aa16.47■□□□□ 0.23
DDX56-207ENST00000448192 KLF13Q9Y2Y9 288 aaPredicted RBP16.47■□□□□ 0.23
DDX56-207ENST00000448192 YARS2Q9Y2Z4 477 aaKnown RBP16.47■□□□□ 0.23
DDX56-207ENST00000448192 H0YIV9 168 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 PLPP1O14494 284 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 UGDHO60701 494 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 OR2J2O76002 312 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 TUBB4AP04350 444 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 RBP1P09455 135 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 PTX3P26022 381 aaPredicted RBP16.46■□□□□ 0.23
DDX56-207ENST00000448192 RFC3P40938 356 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 MEOX1P50221 254 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 C3AR1Q16581 482 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 RNFT1Q5M7Z0 435 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 MDGA2Q7Z553 956 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 GPR180Q86V85 440 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 SIAH3Q8IW03 269 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 SULF2Q8IWU5 870 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 ZNF321PQ8N8H1 164 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 SLC2A12Q8TD20 617 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 ATP6V1E2Q96A05 226 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 ANKRD9Q96BM1 317 aaPredicted RBP16.46■□□□□ 0.23
DDX56-207ENST00000448192 CCDC120Q96HB5 630 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 RPF2Q9H7B2 306 aaKnown RBP16.46■□□□□ 0.23
DDX56-207ENST00000448192 NOL11Q9H8H0 719 aaKnown RBP16.46■□□□□ 0.23
DDX56-207ENST00000448192 XPR1Q9UBH6 696 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 TINAGQ9UJW2 476 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 TSC22D4Q9Y3Q8 395 aa16.46■□□□□ 0.23
DDX56-207ENST00000448192 GTF3C1Q12789 2109 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 A0A087WUV0 522 aaPredicted RBP16.45■□□□□ 0.22
DDX56-207ENST00000448192 TMEM200CA6NKL6 621 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 TRIM49D1C9J1S8 452 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 KLRC4-KLRK1H3BQV0 150 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
DDX56-207ENST00000448192 WWP2O00308 870 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 ZNHIT1O43257 154 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 PEX1O43933 1283 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 FGF17O60258 216 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 SMIM24O75264 130 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 CLDN9O95484 217 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 TLX1P31314 330 aaPredicted RBP16.45■□□□□ 0.22
DDX56-207ENST00000448192 MAGEA12P43365 314 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 NEK2P51955 445 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 HSF1Q00613 529 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 TSNAXIP1Q2TAA8 658 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 METTL2BQ6P1Q9 378 aaKnown RBP16.45■□□□□ 0.22
DDX56-207ENST00000448192 MTFR2Q6P444 385 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 SPPL2CQ8IUH8 684 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 L3MBTL4Q8NA19 623 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 POGLUT1Q8NBL1 392 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 KIF18AQ8NI77 898 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 DCAKDQ8WVC6 231 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 ASB15Q8WXK1 588 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 ISL2Q96A47 359 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 MTFMTQ96DP5 389 aaKnown RBP16.45■□□□□ 0.22
DDX56-207ENST00000448192 CDK15Q96Q40 435 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 TIMMDC1Q9NPL8 285 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 MS4A12Q9NXJ0 267 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 MYOTQ9UBF9 498 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 PHF11Q9UIL8 331 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 TMCO1Q9UM00 188 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 NFU1Q9UMS0 254 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 ATG4BQ9Y4P1 393 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 CACNA1DQ01668 2161 aa16.45■□□□□ 0.22
DDX56-207ENST00000448192 EML6Q6ZMW3 1958 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 A8MVJ9 347 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 OR7A17O14581 309 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 TFECO14948 347 aaPredicted RBP16.44■□□□□ 0.22
DDX56-207ENST00000448192 PRKRAO75569 313 aaKnown RBP16.44■□□□□ 0.22
DDX56-207ENST00000448192 ETHE1O95571 254 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 ESRRAP11474 423 aaPredicted RBP16.44■□□□□ 0.22
DDX56-207ENST00000448192 COX7A2P14406 83 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 ABOP16442 354 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 CNTFP26441 200 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 CCNG1P51959 295 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 HK2P52789 917 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
DDX56-207ENST00000448192 GPR85P60893 370 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 TNFRSF17Q02223 184 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 C18orf63Q68DL7 685 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 CYP20A1Q6UW02 462 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 IL20RBQ6UXL0 311 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 GHDCQ8N2G8 530 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 ZCCHC7Q8N3Z6 543 aaKnown RBP16.44■□□□□ 0.22
DDX56-207ENST00000448192 OR52B6Q8NGF0 335 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 PPWD1Q96BP3 646 aaKnown RBP16.44■□□□□ 0.22
DDX56-207ENST00000448192 DGAT2Q96PD7 388 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 COPS7AQ9UBW8 275 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 ZNF180Q9UJW8 692 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 ZNF835Q9Y2P0 537 aa16.44■□□□□ 0.22
DDX56-207ENST00000448192 EXOC1LA0A1B0GW35 172 aa16.43■□□□□ 0.22
DDX56-207ENST00000448192 PRSS44E7EML9 344 aa16.43■□□□□ 0.22
DDX56-207ENST00000448192 STX16-NPEPL1H3BU86 382 aa16.43■□□□□ 0.22
DDX56-207ENST00000448192 STX16O14662 325 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms