RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 WWP2O00308 870 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 PLPP1O14494 284 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 FGF17O60258 216 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 OR6B1O95007 311 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 ACSL3O95573 720 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 MLYCDO95822 493 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 ZNF24P17028 368 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 PTGER1P34995 402 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 SSR2P43308 183 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 MAGEA12P43365 314 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 SERPINB8P50452 374 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 NR0B1P51843 470 aaKnown RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 IGLV3-21P80748 117 aaPredicted RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 GTF2H2Q13888 395 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 SERTAD2Q14140 314 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 TECRLQ5HYJ1 363 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 C18orf63Q68DL7 685 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 GTF2H2CQ6P1K8 395 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 HSDL2Q6YN16 418 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 DGAT2L6Q6ZPD8 337 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 NCCRP1Q6ZVX7 275 aaPredicted RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 MYLK4Q86YV6 388 aaPredicted RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 GHDCQ8N2G8 530 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 ZNF808Q8N4W9 903 aaPredicted RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 OR14A16Q8NHC5 309 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 C16orf52Q8NHV5 167 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 ZNF721Q8TF20 911 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 IFT81Q8WYA0 676 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 ZNF592Q92610 1267 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 RGMAQ96B86 450 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 MAGED4Q96JG8 741 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 RASL10BQ96S79 203 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 IPPKQ9H8X2 491 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 CPSF2Q9P2I0 782 aaKnown RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 MTRF1LQ9UGC7 380 aaKnown RBP19.27■□□□□ 0.68
SDC1-205ENST00000447124 ATG4BQ9Y4P1 393 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 PCDHGA11Q9Y5H2 935 aa19.27■□□□□ 0.68
SDC1-205ENST00000447124 ARHGAP10A1A4S6 786 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 PINLYPA6NC86 204 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 H0YIV9 168 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 KLRC4-KLRK1H3BQV0 150 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 EEDO75530 441 aaKnown RBP19.26■□□□□ 0.67
SDC1-205ENST00000447124 PRF1P14222 555 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 NEK2P51955 445 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 HK2P52789 917 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 CASP6P55212 293 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 HNRNPH2P55795 449 aaKnown RBP19.26■□□□□ 0.67
SDC1-205ENST00000447124 GPR85P60893 370 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 CDSNQ15517 529 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 CPSF6Q16630 551 aaKnown RBP eCLIP19.26■□□□□ 0.67
SDC1-205ENST00000447124 IL20RBQ6UXL0 311 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 DOLPP1Q86YN1 238 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 L3MBTL4Q8NA19 623 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 ZFP62Q8NB50 900 aaPredicted RBP19.26■□□□□ 0.67
SDC1-205ENST00000447124 POGLUT1Q8NBL1 392 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 WDR20Q8TBZ3 569 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 SLC2A12Q8TD20 617 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 DOK4Q8TEW6 326 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 UCN3Q969E3 161 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 ISL2Q96A47 359 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 PPWD1Q96BP3 646 aaKnown RBP19.26■□□□□ 0.67
SDC1-205ENST00000447124 PHF12Q96QT6 1004 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 ACTR8Q9H981 624 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 MEMO1Q9Y316 297 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 HRH3Q9Y5N1 445 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 PKDREJQ9NTG1 2253 aa19.26■□□□□ 0.67
SDC1-205ENST00000447124 NCOA6Q14686 2063 aaPredicted RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 SYNDIG1LA6NDD5 238 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 OR7A17O14581 309 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 ADAM10O14672 748 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 PRKRAO75569 313 aaKnown RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 ESRRAP11474 423 aaPredicted RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 PTX3P26022 381 aaPredicted RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 BSGP35613 385 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 SOX3P41225 446 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 PIK3CGP48736 1102 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 RNF4P78317 190 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 ZNF750Q32MQ0 723 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 MRM1Q6IN84 353 aaKnown RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 MTFR2Q6P444 385 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 KLC3Q6P597 504 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 GPR180Q86V85 440 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 ZCCHC7Q8N3Z6 543 aaKnown RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 PTGR2Q8N8N7 351 aaPredicted RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 UHMK1Q8TAS1 419 aaKnown RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 SENP5Q96HI0 755 aaPredicted RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 ASB4Q9Y574 426 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 KLF2Q9Y5W3 355 aaPredicted RBP19.25■□□□□ 0.67
SDC1-205ENST00000447124 SPACA6W5XKT8 324 aa19.25■□□□□ 0.67
SDC1-205ENST00000447124 A8MVJ9 347 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 HRKO00198 91 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 HNRNPRO43390 633 aaKnown RBP19.24■□□□□ 0.67
SDC1-205ENST00000447124 PROM1O43490 865 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 TMPRSS11DO60235 418 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 HS6ST1O60243 411 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 UGDHO60701 494 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 STT3AP46977 705 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 RAP1GDS1P52306 607 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 CMPK2Q5EBM0 449 aa19.24■□□□□ 0.67
SDC1-205ENST00000447124 RPTNQ6XPR3 784 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms